RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
CNN3-203ENST00000415017 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 FSD1Q9BTV5 496 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 JAG2Q9Y219 1238 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 RAD17O75943 681 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 CHGBP05060 677 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 TNIP1Q15025 636 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 C9orf131Q5VYM1 1079 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 ERICH6Q7L0X2 663 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNN3-203ENST00000415017 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
CNN3-203ENST00000415017 GAKO14976 1311 aa16.06■□□□□ 0.16
CNN3-203ENST00000415017 ZNF541Q9H0D2 1346 aa16.06■□□□□ 0.16
CNN3-203ENST00000415017 IDH1O75874 414 aaKnown RBP16.06■□□□□ 0.16
CNN3-203ENST00000415017 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
CNN3-203ENST00000415017 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
CNN3-203ENST00000415017 LRRFIP1Q32MZ4 808 aaKnown RBP16.06■□□□□ 0.16
CNN3-203ENST00000415017 SLC9C2Q5TAH2 1124 aa16.06■□□□□ 0.16
CNN3-203ENST00000415017 DPF2Q92785 391 aa16.06■□□□□ 0.16
CNN3-203ENST00000415017 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
CNN3-203ENST00000415017 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
CNN3-203ENST00000415017 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 PPP4CP60510 307 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 HHIPL2Q6UWX4 724 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 ADGRA1Q86SQ6 560 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 GPC2Q8N158 579 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 APPBP2Q92624 585 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 IL25Q9H293 177 aa16.05■□□□□ 0.16
CNN3-203ENST00000415017 MAST3O60307 1309 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 RAD50Q92878 1312 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 SCN4AP35499 1836 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 SGSM2O43147 1006 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
CNN3-203ENST00000415017 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
CNN3-203ENST00000415017 NMIQ13287 307 aaPredicted RBP16.04■□□□□ 0.16
CNN3-203ENST00000415017 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 MAGEB6Q8N7X4 407 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 MTMR14Q8NCE2 650 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 OSBP2Q969R2 916 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 ZBED3Q96IU2 234 aaPredicted RBP16.04■□□□□ 0.16
CNN3-203ENST00000415017 FAM227BQ96M60 508 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
CNN3-203ENST00000415017 WDR90Q96KV7 1748 aa16.03■□□□□ 0.16
CNN3-203ENST00000415017 GPR75-ASB3A0A0A6YYF3 556 aa16.03■□□□□ 0.16
CNN3-203ENST00000415017 NAA16Q6N069 864 aaPredicted RBP16.03■□□□□ 0.16
CNN3-203ENST00000415017 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
CNN3-203ENST00000415017 ESYT1Q9BSJ8 1104 aa16.03■□□□□ 0.16
CNN3-203ENST00000415017 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
CNN3-203ENST00000415017 TTF2Q9UNY4 1162 aaKnown RBP16.03■□□□□ 0.16
CNN3-203ENST00000415017 MROH7-TTC4A0A0A0MT08 1334 aa16.02■□□□□ 0.16
CNN3-203ENST00000415017 LDHCP07864 332 aa16.02■□□□□ 0.16
CNN3-203ENST00000415017 GSTO1P78417 241 aa16.02■□□□□ 0.16
CNN3-203ENST00000415017 DIXDC1Q155Q3 683 aa16.02■□□□□ 0.16
CNN3-203ENST00000415017 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.16
CNN3-203ENST00000415017 ZDHHC15Q96MV8 337 aa16.02■□□□□ 0.16
CNN3-203ENST00000415017 SEC62Q99442 399 aaKnown RBP16.02■□□□□ 0.16
CNN3-203ENST00000415017 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
CNN3-203ENST00000415017 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
CNN3-203ENST00000415017 M0R2C6 588 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 EPB41L2O43491 1005 aaKnown RBP16.01■□□□□ 0.15
CNN3-203ENST00000415017 CYP7A1P22680 504 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 CWC27Q6UX04 472 aaKnown RBP16.01■□□□□ 0.15
CNN3-203ENST00000415017 DZIP1Q86YF9 867 aaKnown RBP16.01■□□□□ 0.15
CNN3-203ENST00000415017 KIAA0825Q8IV33 1275 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 SLF2Q8IX21 1173 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
CNN3-203ENST00000415017 BACH2Q9BYV9 841 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 DAGLAQ9Y4D2 1042 aa16.01■□□□□ 0.15
CNN3-203ENST00000415017 FOXP2O15409 715 aa16■□□□□ 0.15
CNN3-203ENST00000415017 USP17L8P0C7I0 530 aa16■□□□□ 0.15
CNN3-203ENST00000415017 CRKP46108 304 aa16■□□□□ 0.15
CNN3-203ENST00000415017 GMPSP49915 693 aaPredicted RBP16■□□□□ 0.15
CNN3-203ENST00000415017 SCNN1DP51172 638 aa16■□□□□ 0.15
CNN3-203ENST00000415017 APOBEC3HQ6NTF7 200 aaKnown RBP16■□□□□ 0.15
CNN3-203ENST00000415017 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
CNN3-203ENST00000415017 POTEDQ86YR6 584 aa16■□□□□ 0.15
CNN3-203ENST00000415017 RUFY2Q8WXA3 655 aa16■□□□□ 0.15
CNN3-203ENST00000415017 FBXW7Q969H0 707 aa16■□□□□ 0.15
CNN3-203ENST00000415017 STRBPQ96SI9 672 aaKnown RBP16■□□□□ 0.15
CNN3-203ENST00000415017 RHBDL3P58872 404 aa15.99■□□□□ 0.15
CNN3-203ENST00000415017 CASC1Q6TDU7 716 aa15.99■□□□□ 0.15
CNN3-203ENST00000415017 CERS3Q8IU89 383 aa15.99■□□□□ 0.15
CNN3-203ENST00000415017 TEKT1Q969V4 418 aa15.99■□□□□ 0.15
CNN3-203ENST00000415017 GPRC5DQ9NZD1 345 aa15.99■□□□□ 0.15
CNN3-203ENST00000415017 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
CNN3-203ENST00000415017 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
CNN3-203ENST00000415017 BAZ2AQ9UIF9 1905 aaKnown RBP15.98■□□□□ 0.15
CNN3-203ENST00000415017 GLTPD2A6NH11 291 aa15.98■□□□□ 0.15
CNN3-203ENST00000415017 GPAA1O43292 621 aa15.98■□□□□ 0.15
CNN3-203ENST00000415017 SEC24BO95487 1268 aa15.98■□□□□ 0.15
CNN3-203ENST00000415017 LSG1Q9H089 658 aaKnown RBP15.98■□□□□ 0.15
CNN3-203ENST00000415017 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
CNN3-203ENST00000415017 RPAP1Q9BWH6 1393 aaPredicted RBP15.98■□□□□ 0.15
CNN3-203ENST00000415017 MYH1P12882 1939 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms