RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 AAMPQ13685 434 aa11.38□□□□□ -0.59
TRA2B-204ENST00000414862 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRA2B-204ENST00000414862 ECM1Q16610 540 aa11.38□□□□□ -0.59
TRA2B-204ENST00000414862 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
TRA2B-204ENST00000414862 ATCAYQ86WG3 371 aa11.38□□□□□ -0.59
TRA2B-204ENST00000414862 PMFBP1Q8TBY8 1022 aa11.38□□□□□ -0.59
TRA2B-204ENST00000414862 GZF1Q9H116 711 aaPredicted RBP11.38□□□□□ -0.59
TRA2B-204ENST00000414862 BIN2Q9UBW5 565 aaPredicted RBP11.38□□□□□ -0.59
TRA2B-204ENST00000414862 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
TRA2B-204ENST00000414862 APBA3O96018 575 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 FGFR3P22607 806 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 SFSWAPQ12872 951 aaKnown RBP11.37□□□□□ -0.59
TRA2B-204ENST00000414862 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
TRA2B-204ENST00000414862 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 NBPF8Q3BBV2 869 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 PRAM1Q96QH2 718 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 CAMKK2Q96RR4 588 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 FAM13BQ9NYF5 915 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 MARK1Q9P0L2 795 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 KCNH4Q9UQ05 1017 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 NINLQ9Y2I6 1382 aa11.37□□□□□ -0.59
TRA2B-204ENST00000414862 EPB42P16452 691 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 ARHGAP4P98171 946 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 RGL4Q8IZJ4 473 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 STRN4Q9NRL3 753 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 POGKQ9P215 609 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 HCN2Q9UL51 889 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 USP20Q9Y2K6 914 aa11.36□□□□□ -0.59
TRA2B-204ENST00000414862 WFS1O76024 890 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 CD33P20138 364 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 KCNQ4P56696 695 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 GAS6Q14393 721 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 GPR152Q8TDT2 470 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
TRA2B-204ENST00000414862 UTRNP46939 3433 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
TRA2B-204ENST00000414862 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
TRA2B-204ENST00000414862 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
TRA2B-204ENST00000414862 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-204ENST00000414862 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
TRA2B-204ENST00000414862 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
TRA2B-204ENST00000414862 TRPM3Q9HCF6 1732 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-204ENST00000414862 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
TRA2B-204ENST00000414862 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
TRA2B-204ENST00000414862 KIAA0232Q92628 1395 aa11.33□□□□□ -0.6
TRA2B-204ENST00000414862 GRNP28799 593 aaKnown RBP11.33□□□□□ -0.6
TRA2B-204ENST00000414862 CTBSQ01459 385 aa11.33□□□□□ -0.6
TRA2B-204ENST00000414862 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
TRA2B-204ENST00000414862 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
TRA2B-204ENST00000414862 SND1Q7KZF4 910 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRA2B-204ENST00000414862 EDEM1Q92611 657 aa11.33□□□□□ -0.6
TRA2B-204ENST00000414862 TULP4Q9NRJ4 1543 aa11.33□□□□□ -0.6
TRA2B-204ENST00000414862 RGPD8O14715 1765 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-204ENST00000414862 FZD6O60353 706 aa11.32□□□□□ -0.6
TRA2B-204ENST00000414862 MX2P20592 715 aa11.32□□□□□ -0.6
TRA2B-204ENST00000414862 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
TRA2B-204ENST00000414862 NGDNQ8NEJ9 315 aaKnown RBP11.32□□□□□ -0.6
TRA2B-204ENST00000414862 RREB1Q92766 1687 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 MZF1P28698 734 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-204ENST00000414862 RNFT1Q5M7Z0 435 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 CCDC87Q9NVE4 849 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 USP35Q9P2H5 1018 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 ATP7BP35670 1465 aa11.31□□□□□ -0.6
TRA2B-204ENST00000414862 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
TRA2B-204ENST00000414862 KCNQ2O43526 872 aa11.3□□□□□ -0.6
TRA2B-204ENST00000414862 NUDT16Q96DE0 195 aaKnown RBP11.3□□□□□ -0.6
TRA2B-204ENST00000414862 HIRIP3Q9BW71 556 aaPredicted RBP11.3□□□□□ -0.6
TRA2B-204ENST00000414862 MBIPQ9NS73 344 aa11.3□□□□□ -0.6
TRA2B-204ENST00000414862 BRPF3Q9ULD4 1205 aa11.3□□□□□ -0.6
TRA2B-204ENST00000414862 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
TRA2B-204ENST00000414862 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 C2CD2LO14523 706 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 PDGFAP04085 211 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 BMP4P12644 408 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 PCSK2P16519 638 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 EVA1CP58658 441 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 SPEM2Q0P670 501 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 C11orf16Q9NQ32 467 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
TRA2B-204ENST00000414862 GMPRP36959 345 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 KRT76Q01546 638 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 MPHOSPH9Q99550 1183 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 SLC30A3Q99726 388 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 GSX2Q9BZM3 304 aa11.28□□□□□ -0.6
TRA2B-204ENST00000414862 NSFL1CQ9UNZ2 370 aaKnown RBP11.28□□□□□ -0.6
TRA2B-204ENST00000414862 FNDC3AQ9Y2H6 1198 aaKnown RBP11.28□□□□□ -0.6
TRA2B-204ENST00000414862 NDUFB5O43674 189 aa11.27□□□□□ -0.61
TRA2B-204ENST00000414862 XYLBO75191 536 aa11.27□□□□□ -0.61
TRA2B-204ENST00000414862 CCINQ13939 588 aa11.27□□□□□ -0.61
TRA2B-204ENST00000414862 TRIP4Q15650 581 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-204ENST00000414862 TCP11L2Q8N4U5 519 aa11.27□□□□□ -0.61
TRA2B-204ENST00000414862 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.61
TRA2B-204ENST00000414862 ADGRB1O14514 1584 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms