RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.61□□□□□ -1.67
SF3B1-203ENST00000414174 TRPM4Q8TD43 1214 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 VTI1AQ96AJ9 217 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 ASIC4Q96FT7 647 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 PNMA5Q96PV4 448 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 GOLGA6AQ9NYA3 693 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 PPP1R1BQ9UD71 204 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-203ENST00000414174 TMA7Q9Y2S6 64 aaKnown RBP4.61□□□□□ -1.67
SF3B1-203ENST00000414174 SBNO2Q9Y2G9 1366 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 CFAP69A5D8W1 941 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 TNFRSF10BO14763 440 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 DHX15O43143 795 aaKnown RBP4.6□□□□□ -1.67
SF3B1-203ENST00000414174 DHX16O60231 1041 aaKnown RBP4.6□□□□□ -1.67
SF3B1-203ENST00000414174 CPB1P15086 417 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 ZNF16P17020 682 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-203ENST00000414174 SCP2P22307 547 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 IGBP1P78318 339 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 HIF1AQ16665 826 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 NAALADL2Q58DX5 795 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 HSP90AB3PQ58FF7 597 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 RNF43Q68DV7 783 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 ELMSAN1Q6PJG2 1045 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 ANKRD23Q86SG2 305 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 MAP4K3Q8IVH8 894 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 ETFBKMTQ8IXQ9 262 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 KCNB2Q92953 911 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 IFT43Q96FT9 208 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 SCYL1Q96KG9 808 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 BSDC1Q9NW68 430 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-203ENST00000414174 CHPF2Q9P2E5 772 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 SWAP70Q9UH65 585 aa4.6□□□□□ -1.67
SF3B1-203ENST00000414174 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.6□□□□□ -1.67
SF3B1-203ENST00000414174 hCG_2014768A0A024R1R8 64 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 ATG7O95352 703 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 ARSDP51689 593 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 MTA1Q13330 715 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 PTPROQ16827 1216 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 SWI5Q1ZZU3 235 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 C11orf91Q3C1V1 193 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 CC2D1BQ5T0F9 858 aaKnown RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 EGFLAMQ63HQ2 1017 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 GET4Q7L5D6 327 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 KRT25Q7Z3Z0 450 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 C11orf96Q7Z7L8 435 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 ZNF830Q96NB3 372 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 UBL7Q96S82 380 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 IRF2BPLQ9H1B7 796 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 CENPJQ9HC77 1338 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 C11orf16Q9NQ32 467 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 FBXO9Q9UK97 447 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 TPX2Q9ULW0 747 aaKnown RBP4.59□□□□□ -1.67
SF3B1-203ENST00000414174 KCNMB2Q9Y691 235 aa4.59□□□□□ -1.67
SF3B1-203ENST00000414174 WDHD1O75717 1129 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 STK10O94804 968 aaKnown RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 TARSP26639 723 aaKnown RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 ANP32AP39687 249 aaKnown RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 POU5F1Q01860 360 aaKnown RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 HSP90AA2PQ14568 343 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 TRIP4Q15650 581 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 CBLL1Q75N03 491 aa4.58□□□□□ -1.68
SF3B1-203ENST00000414174 PCGF5Q86SE9 256 aa4.58□□□□□ -1.68
SF3B1-203ENST00000414174 TREML1Q86YW5 311 aa4.58□□□□□ -1.68
SF3B1-203ENST00000414174 CCAR1Q8IX12 1150 aaKnown RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 DBNDD2Q9BQY9 259 aa4.58□□□□□ -1.68
SF3B1-203ENST00000414174 BRINP2Q9C0B6 783 aa4.58□□□□□ -1.68
SF3B1-203ENST00000414174 CXXC1Q9P0U4 656 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 RTCBQ9Y3I0 505 aaKnown RBP4.58□□□□□ -1.68
SF3B1-203ENST00000414174 TLDC2A0PJX2 215 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 SASH3O75995 380 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 HSP90AA1P07900 732 aaKnown RBP4.57□□□□□ -1.68
SF3B1-203ENST00000414174 GLB1P16278 677 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 VAMP1P23763 118 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 MLLT1Q03111 559 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-203ENST00000414174 UVSSAQ2YD98 709 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 NBPF6Q5VWK0 638 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 ICE2Q659A1 982 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 DNAJC14Q6Y2X3 702 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-203ENST00000414174 NBPF5PQ86XG9 351 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-203ENST00000414174 ABI1Q8IZP0 508 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 ARMC10Q8N2F6 343 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 NBPF4Q96M43 638 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 MKNK1Q9BUB5 465 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 NRBP1Q9UHY1 535 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 SYNPO2Q9UMS6 1093 aa4.57□□□□□ -1.68
SF3B1-203ENST00000414174 EGFRP00533 1210 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 FAM200BP0CF97 657 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 VDRP11473 427 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 JUNBP17275 347 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-203ENST00000414174 SCNN1AP37088 669 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 GPLD1P80108 840 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 XPCQ01831 940 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-203ENST00000414174 TBC1D10BQ4KMP7 808 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-203ENST00000414174 DHX32Q7L7V1 743 aaKnown RBP4.56□□□□□ -1.68
SF3B1-203ENST00000414174 CCDC146Q8IYE0 955 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 RGL4Q8IZJ4 473 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 LSM14AQ8ND56 463 aaKnown RBP4.56□□□□□ -1.68
SF3B1-203ENST00000414174 CLP1Q92989 425 aaKnown RBP4.56□□□□□ -1.68
SF3B1-203ENST00000414174 PBXIP1Q96AQ6 731 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 CEP41Q9BYV8 373 aa4.56□□□□□ -1.68
SF3B1-203ENST00000414174 C7orf69Q9H7B7 122 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms