RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MARCKSP29966 332 aaPredicted RBP19.63■□□□□ 0.73
PHRF1-202ENST00000413872 CYLC1P35663 651 aaPredicted RBP19.63■□□□□ 0.73
PHRF1-202ENST00000413872 PUF60Q9UHX1 559 aaKnown RBP19.63■□□□□ 0.73
PHRF1-202ENST00000413872 MAGI3Q5TCQ9 1506 aa19.63■□□□□ 0.73
PHRF1-202ENST00000413872 GIGYF1O75420 1035 aaPredicted RBP19.63■□□□□ 0.73
PHRF1-202ENST00000413872 FAM13AO94988 1023 aa19.63■□□□□ 0.73
PHRF1-202ENST00000413872 UBASH3AP57075 661 aa19.63■□□□□ 0.73
PHRF1-202ENST00000413872 FAM200AQ8TCP9 573 aa19.63■□□□□ 0.73
PHRF1-202ENST00000413872 SAMD9LQ8IVG5 1584 aa19.63■□□□□ 0.73
PHRF1-202ENST00000413872 TMCO5BA8MYB1 307 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 NOP2P46087 812 aaKnown RBP19.62■□□□□ 0.73
PHRF1-202ENST00000413872 USP48Q86UV5 1035 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 JAG2Q9Y219 1238 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 IBTKQ9P2D0 1353 aaPredicted RBP19.62■□□□□ 0.73
PHRF1-202ENST00000413872 MACROD2A1Z1Q3 448 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 DEXIO95424 95 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 IQUBQ8NA54 791 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 GPAA1O43292 621 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 PPP1R2P41236 205 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 RPS8P62241 208 aaKnown RBP19.62■□□□□ 0.73
PHRF1-202ENST00000413872 CHST3Q7LGC8 479 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 VTI1AQ96AJ9 217 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 LLPHQ9BRT6 129 aaKnown RBP19.62■□□□□ 0.73
PHRF1-202ENST00000413872 TCHPQ9BT92 498 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 MYOM2P54296 1465 aa19.62■□□□□ 0.73
PHRF1-202ENST00000413872 ISM2Q6H9L7 571 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 DACT1Q9NYF0 836 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 ATP7BP35670 1465 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 RPS6KB1P23443 525 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 RILPL1Q5EBL4 403 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 DHX58Q96C10 678 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 TRPC5Q9UL62 973 aaPredicted RBP19.61■□□□□ 0.73
PHRF1-202ENST00000413872 NEURL1BA8MQ27 555 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 DNM1Q05193 864 aaKnown RBP19.61■□□□□ 0.73
PHRF1-202ENST00000413872 GIMAP6Q6P9H5 292 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 CCDC91Q7Z6B0 441 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 ZSCAN23Q3MJ62 389 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 CARD10Q9BWT7 1032 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 ARMT1Q9H993 441 aa19.61■□□□□ 0.73
PHRF1-202ENST00000413872 ANGEL1Q9UNK9 670 aaKnown RBP19.61■□□□□ 0.73
PHRF1-202ENST00000413872 RAB3GAP1Q15042 981 aa19.6■□□□□ 0.73
PHRF1-202ENST00000413872 KIF4AO95239 1232 aa19.6■□□□□ 0.73
PHRF1-202ENST00000413872 NIM1KQ8IY84 436 aa19.6■□□□□ 0.73
PHRF1-202ENST00000413872 SPATA5Q8NB90 893 aa19.6■□□□□ 0.73
PHRF1-202ENST00000413872 ZNF594Q96JF6 807 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-202ENST00000413872 APBB1IPQ7Z5R6 666 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-202ENST00000413872 TNNT1P13805 278 aa19.6■□□□□ 0.73
PHRF1-202ENST00000413872 LZTS2Q9BRK4 669 aa19.6■□□□□ 0.73
PHRF1-202ENST00000413872 SAP30BPQ9UHR5 308 aaKnown RBP19.6■□□□□ 0.73
PHRF1-202ENST00000413872 STK24Q9Y6E0 443 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 ACTN2P35609 894 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 PRPHP41219 470 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 KDRP35968 1356 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 B4E1Z4 1266 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 FMNL3Q8IVF7 1028 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 CFAP65Q6ZU64 1925 aaKnown RBP19.59■□□□□ 0.73
PHRF1-202ENST00000413872 CTSWP56202 376 aa19.59■□□□□ 0.73
PHRF1-202ENST00000413872 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.73
PHRF1-202ENST00000413872 METP08581 1390 aa19.58■□□□□ 0.73
PHRF1-202ENST00000413872 MCM7P33993 719 aa19.58■□□□□ 0.73
PHRF1-202ENST00000413872 TTC12Q9H892 705 aaPredicted RBP19.58■□□□□ 0.73
PHRF1-202ENST00000413872 GCOM1H8Y6P7 765 aaPredicted RBP19.58■□□□□ 0.73
PHRF1-202ENST00000413872 DKC1O60832 514 aaKnown RBP eCLIP19.58■□□□□ 0.73
PHRF1-202ENST00000413872 MYZAPP0CAP1 466 aa19.58■□□□□ 0.73
PHRF1-202ENST00000413872 PLCD1P51178 756 aa19.58■□□□□ 0.72
PHRF1-202ENST00000413872 GRM1Q13255 1194 aa19.58■□□□□ 0.72
PHRF1-202ENST00000413872 SLC27A2O14975 620 aa19.58■□□□□ 0.72
PHRF1-202ENST00000413872 IFFO1Q0D2I5 559 aa19.58■□□□□ 0.72
PHRF1-202ENST00000413872 IL17REQ8NFR9 667 aa19.58■□□□□ 0.72
PHRF1-202ENST00000413872 SYNCQ9H7C4 482 aa19.58■□□□□ 0.72
PHRF1-202ENST00000413872 HECW2Q9P2P5 1572 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 SGSM2O43147 1006 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 ANO6Q4KMQ2 910 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 TAF3Q5VWG9 929 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 DDX12PQ92771 950 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 ATP5JP18859 108 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 BACH1O14867 736 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 TAF5LO75529 589 aa19.57■□□□□ 0.72
PHRF1-202ENST00000413872 SNW1Q13573 536 aaKnown RBP19.57■□□□□ 0.72
PHRF1-202ENST00000413872 RPL13P26373 211 aaKnown RBP19.56■□□□□ 0.72
PHRF1-202ENST00000413872 DNA2P51530 1060 aa19.56■□□□□ 0.72
PHRF1-202ENST00000413872 BRDTQ58F21 947 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-202ENST00000413872 PCCAP05165 728 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-202ENST00000413872 ARHGEF25Q86VW2 580 aa19.56■□□□□ 0.72
PHRF1-202ENST00000413872 ZBTB38Q8NAP3 1195 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-202ENST00000413872 ZKSCAN3Q9BRR0 538 aa19.56■□□□□ 0.72
PHRF1-202ENST00000413872 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
PHRF1-202ENST00000413872 TRMT1Q9NXH9 659 aaKnown RBP19.56■□□□□ 0.72
PHRF1-202ENST00000413872 CCDC65Q8IXS2 484 aa19.56■□□□□ 0.72
PHRF1-202ENST00000413872 ERVK-7P63135 1459 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 ATP2B4P23634 1241 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 DYDC1Q8WWB3 177 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 NLGN1Q8N2Q7 840 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 GOLGA6L10A0A0M3HER8 536 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 DLGAP5Q15398 846 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 HAUS3Q68CZ6 603 aa19.55■□□□□ 0.72
PHRF1-202ENST00000413872 AATFQ9NY61 560 aaKnown RBP eCLIP19.55■□□□□ 0.724e-7■■■■■ 34.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms