RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 USP27XA6NNY8 438 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 GPTP24298 496 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 ZRSR1Q15695 479 aaKnown RBP17.41■□□□□ 0.38
TTC39A-208ENST00000413473 DPCR1Q3MIW9 517 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.41■□□□□ 0.38
TTC39A-208ENST00000413473 PAXBP1Q9Y5B6 917 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 COL5A2P05997 1499 aaPredicted RBP17.41■□□□□ 0.38
TTC39A-208ENST00000413473 KIF23Q02241 960 aaPredicted RBP17.41■□□□□ 0.38
TTC39A-208ENST00000413473 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 ITGA6P23229 1130 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 TRDNQ13061 729 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 NKX2-3Q8TAU0 364 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 ZNF592Q92610 1267 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 GREM2Q9H772 168 aa17.41■□□□□ 0.38
TTC39A-208ENST00000413473 ZNF202O95125 648 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 HLFQ16534 295 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 AIFM3Q96NN9 605 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 NEDD4P46934 1319 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 BIN1O00499 593 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 APPP05067 770 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 ADD2P35612 726 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 EVA1CP58658 441 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 CCZ1BP86790 482 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 CCZ1P86791 482 aaPredicted RBP17.4■□□□□ 0.38
TTC39A-208ENST00000413473 AXDND1Q5T1B0 1012 aaPredicted RBP17.4■□□□□ 0.38
TTC39A-208ENST00000413473 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 CCDC112Q8NEF3 446 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
TTC39A-208ENST00000413473 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.37
TTC39A-208ENST00000413473 CBX1P83916 185 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 NCBP1Q09161 790 aaKnown RBP17.39■□□□□ 0.37
TTC39A-208ENST00000413473 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
TTC39A-208ENST00000413473 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 WDR19Q8NEZ3 1342 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 IDH1O75874 414 aaKnown RBP17.39■□□□□ 0.37
TTC39A-208ENST00000413473 CYB5R4Q7L1T6 521 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 TBC1D10CQ8IV04 446 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 PIGBQ92521 554 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 TEX13AQ9BXU3 409 aaPredicted RBP17.39■□□□□ 0.37
TTC39A-208ENST00000413473 ANGEL1Q9UNK9 670 aaKnown RBP17.39■□□□□ 0.37
TTC39A-208ENST00000413473 PAPPAQ13219 1627 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 RIC1Q4ADV7 1423 aa17.39■□□□□ 0.37
TTC39A-208ENST00000413473 RXRAP19793 462 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
TTC39A-208ENST00000413473 SMAP1Q8IYB5 467 aaPredicted RBP17.38■□□□□ 0.37
TTC39A-208ENST00000413473 TRMT1Q9NXH9 659 aaKnown RBP17.38■□□□□ 0.37
TTC39A-208ENST00000413473 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 WDHD1O75717 1129 aaPredicted RBP17.38■□□□□ 0.37
TTC39A-208ENST00000413473 STARD3NLO95772 234 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 PFKFB1P16118 471 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 CMA1P23946 247 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 PIH1D3Q9NQM4 214 aaKnown RBP17.38■□□□□ 0.37
TTC39A-208ENST00000413473 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
TTC39A-208ENST00000413473 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 METAP2P50579 478 aaKnown RBP eCLIP17.37■□□□□ 0.37
TTC39A-208ENST00000413473 NAA30Q147X3 362 aaPredicted RBP17.37■□□□□ 0.37
TTC39A-208ENST00000413473 PTPN14Q15678 1187 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 ALG1Q9BT22 464 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 MYH7P12883 1935 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 AKAP11Q9UKA4 1901 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 SLC39A14Q15043 492 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 SENP2Q9HC62 589 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 KAT6BQ8WYB5 2073 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 ZMYM6O95789 1325 aa17.37■□□□□ 0.37
TTC39A-208ENST00000413473 NLRP12P59046 1061 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 NYAP1Q6ZVC0 841 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 BPIFA3Q9BQP9 254 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 XPO4Q9C0E2 1151 aaKnown RBP17.36■□□□□ 0.37
TTC39A-208ENST00000413473 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 ZNF532Q9HCE3 1301 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 B4E1Z4 1266 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
TTC39A-208ENST00000413473 SMC2O95347 1197 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.37
TTC39A-208ENST00000413473 CTSWP56202 376 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 GSDMDP57764 484 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 TTF1Q15361 905 aaPredicted RBP17.36■□□□□ 0.37
TTC39A-208ENST00000413473 ISM2Q6H9L7 571 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 PHKBQ93100 1093 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 OSBPL5Q9H0X9 879 aaPredicted RBP17.36■□□□□ 0.37
TTC39A-208ENST00000413473 IFNKQ9P0W0 207 aa17.36■□□□□ 0.37
TTC39A-208ENST00000413473 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 CDC27P30260 824 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 SYCP1Q15431 976 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 KRT40Q6A162 431 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 CCAR2Q8N163 923 aaKnown RBP17.35■□□□□ 0.37
TTC39A-208ENST00000413473 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-208ENST00000413473 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-208ENST00000413473 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-208ENST00000413473 PHKA1P46020 1223 aa17.35■□□□□ 0.37
TTC39A-208ENST00000413473 MICU3Q86XE3 530 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms