RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 A0A0G2JS52 829 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 NOLC1Q14978 699 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 TBC1D10CQ8IV04 446 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 DNAJC25Q9H1X3 360 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 LRP5O75197 1615 aa13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 CDKL5O76039 1030 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 SIK1P57059 783 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 FAM177BA6PVY3 158 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 IGHMBP2P38935 993 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 SF3A1Q15459 793 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 OTUD7BQ6GQQ9 843 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 FSIP1Q8NA03 581 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 MYH15Q9Y2K3 1946 aa13.39□□□□□ -0.27
TRAFD1-202ENST00000412615 YEATS4O95619 227 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 STK38Q15208 465 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 STX1AQ16623 288 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 MAGEB6Q8N7X4 407 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 LINC00301Q8NCQ3 95 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 MRPS27Q92552 414 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 SEC31BQ9NQW1 1179 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 ADAMTS2O95450 1211 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 DNTTIP2Q5QJE6 756 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 MYSM1Q5VVJ2 828 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 IFNL3Q8IZI9 196 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 SLIT2O94813 1529 aa13.38□□□□□ -0.27
TRAFD1-202ENST00000412615 B4E1Z4 1266 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 NAPBQ9H115 298 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 DENND2AQ9ULE3 1009 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 WNK3Q9BYP7 1800 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
TRAFD1-202ENST00000412615 MBD4O95243 580 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 GNAT2P19087 354 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ZNF75DP51815 510 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ITPK1Q13572 414 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 PLA2G4DQ86XP0 818 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 IGDCC4Q8TDY8 1250 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 CLIC4Q9Y696 253 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 SNAP23O00161 211 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 SPTLC2O15270 562 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ZBTB43O43298 467 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 NTSR2O95665 410 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 NFXL1Q6ZNB6 911 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 DRC7Q8IY82 874 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 FMR1NBQ8N0W7 255 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 KIAA1524Q8TCG1 905 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 LIFRP42702 1097 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 IQCB1Q15051 598 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 TMEM67Q5HYA8 995 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 SDF4Q9BRK5 362 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 KCNF1Q9H3M0 494 aa13.36□□□□□ -0.27
TRAFD1-202ENST00000412615 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms