RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ALX1Q15699 326 aa28.88■■■□□ 2.21
VRK2-202ENST00000412104 NBPF5PQ86XG9 351 aaPredicted RBP28.88■■■□□ 2.21
VRK2-202ENST00000412104 CELF1Q92879 486 aaKnown RBP28.88■■■□□ 2.21
VRK2-202ENST00000412104 KIF3AQ9Y496 699 aa28.88■■■□□ 2.21
VRK2-202ENST00000412104 AFF2P51816 1311 aa28.88■■■□□ 2.21
VRK2-202ENST00000412104 TRDNQ13061 729 aa28.88■■■□□ 2.21
VRK2-202ENST00000412104 EPB41L4AQ9HCS5 686 aaPredicted RBP28.87■■■□□ 2.21
VRK2-202ENST00000412104 MINPP1Q9UNW1 487 aa28.87■■■□□ 2.21
VRK2-202ENST00000412104 MYH15Q9Y2K3 1946 aa28.87■■■□□ 2.21
VRK2-202ENST00000412104 CHD4Q14839 1912 aa28.87■■■□□ 2.21
VRK2-202ENST00000412104 PATL2C9JE40 543 aaKnown RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 CCDC173Q0VFZ6 552 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 NAA16Q6N069 864 aaPredicted RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 FAM43AQ8N2R8 423 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 TSPY26PQ9H489 355 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 ARMT1Q9H993 441 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 DENND2AQ9ULE3 1009 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 KLF18A0A0U1RQI7 1052 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 GYG1P46976 350 aa28.86■■■□□ 2.21
VRK2-202ENST00000412104 ANP32BQ92688 251 aaKnown RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 ARHGEF1Q92888 912 aaKnown RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 SCAND2PQ9GZW5 306 aaPredicted RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 ZSCAN16Q9H4T2 348 aaPredicted RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 IQSEC3Q9UPP2 1182 aaPredicted RBP28.86■■■□□ 2.21
VRK2-202ENST00000412104 IFNL3Q8IZI9 196 aa28.85■■■□□ 2.21
VRK2-202ENST00000412104 NLRP3Q96P20 1036 aa28.85■■■□□ 2.21
VRK2-202ENST00000412104 COL1A1P02452 1464 aaPredicted RBP28.85■■■□□ 2.21
VRK2-202ENST00000412104 TIAM2Q8IVF5 1701 aa28.85■■■□□ 2.21
VRK2-202ENST00000412104 WTIPA6NIX2 430 aaPredicted RBP28.84■■■□□ 2.21
VRK2-202ENST00000412104 GOLGA8BA8MQT2 603 aa28.84■■■□□ 2.21
VRK2-202ENST00000412104 LRP2BPQ9P2M1 347 aa28.84■■■□□ 2.21
VRK2-202ENST00000412104 CARMIL3Q8ND23 1372 aa28.84■■■□□ 2.21
VRK2-202ENST00000412104 PNPLA7Q6ZV29 1317 aa28.84■■■□□ 2.21
VRK2-202ENST00000412104 PPP1R9BQ96SB3 815 aa28.84■■■□□ 2.21
VRK2-202ENST00000412104 GNL3LQ9NVN8 582 aaKnown RBP28.84■■■□□ 2.21
VRK2-202ENST00000412104 HPS5Q9UPZ3 1129 aa28.84■■■□□ 2.21
VRK2-202ENST00000412104 FOSBP53539 338 aa28.83■■■□□ 2.21
VRK2-202ENST00000412104 NKX2-3Q8TAU0 364 aa28.83■■■□□ 2.21
VRK2-202ENST00000412104 SPATA32Q96LK8 384 aa28.83■■■□□ 2.21
VRK2-202ENST00000412104 NAPBQ9H115 298 aa28.83■■■□□ 2.21
VRK2-202ENST00000412104 TFIP11Q9UBB9 837 aaKnown RBP28.83■■■□□ 2.21
VRK2-202ENST00000412104 ONECUT3O60422 494 aaPredicted RBP28.82■■■□□ 2.2
VRK2-202ENST00000412104 LETM1O95202 739 aaPredicted RBP28.82■■■□□ 2.2
VRK2-202ENST00000412104 TPTE2Q6XPS3 522 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 CYB5R4Q7L1T6 521 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 LCORLQ8N3X6 602 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 NEDD4P46934 1319 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 GSG1L2A8MUP6 293 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 PPFIA3O75145 1194 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 HSPA1LP34931 641 aa28.82■■■□□ 2.2
VRK2-202ENST00000412104 LEO1Q8WVC0 666 aaPredicted RBP28.82■■■□□ 2.2
VRK2-202ENST00000412104 GNAT2P19087 354 aa28.81■■■□□ 2.2
VRK2-202ENST00000412104 RPS8P62241 208 aaKnown RBP28.81■■■□□ 2.2
VRK2-202ENST00000412104 CAVIN4Q5BKX8 364 aa28.81■■■□□ 2.2
VRK2-202ENST00000412104 CERKQ8TCT0 537 aa28.81■■■□□ 2.2
VRK2-202ENST00000412104 ANGEL1Q9UNK9 670 aaKnown RBP28.81■■■□□ 2.2
VRK2-202ENST00000412104 TNRC6CQ9HCJ0 1690 aaKnown RBP28.81■■■□□ 2.2
VRK2-202ENST00000412104 B4E1Z4 1266 aa28.81■■■□□ 2.2
VRK2-202ENST00000412104 FDPSP14324 419 aaKnown RBP28.81■■■□□ 2.2
VRK2-202ENST00000412104 SEPT12Q8IYM1 358 aa28.81■■■□□ 2.2
VRK2-202ENST00000412104 CCDC24Q8N4L8 307 aa28.81■■■□□ 2.2
VRK2-202ENST00000412104 DHX16O60231 1041 aaKnown RBP28.8■■■□□ 2.2
VRK2-202ENST00000412104 TRPC5Q9UL62 973 aaPredicted RBP28.8■■■□□ 2.2
VRK2-202ENST00000412104 SH2B2O14492 632 aaPredicted RBP28.79■■■□□ 2.2
VRK2-202ENST00000412104 PRKAB2O43741 272 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 SLC4A4Q9Y6R1 1079 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 RFC4P35249 363 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 VPS37DQ86XT2 251 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 MIGA1Q8NAN2 632 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 RNF214Q8ND24 703 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 FAM84BQ96KN1 310 aaPredicted RBP28.79■■■□□ 2.2
VRK2-202ENST00000412104 ABCF2Q9UG63 623 aa28.79■■■□□ 2.2
VRK2-202ENST00000412104 CACNA1SQ13698 1873 aa28.78■■■□□ 2.2
VRK2-202ENST00000412104 TRAPPC3LQ5T215 181 aa28.78■■■□□ 2.2
VRK2-202ENST00000412104 RAB11FIP4Q86YS3 637 aa28.78■■■□□ 2.2
VRK2-202ENST00000412104 NACAP1Q9BZK3 213 aa28.78■■■□□ 2.2
VRK2-202ENST00000412104 MYH13Q9UKX3 1938 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 CYP7A1P22680 504 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 CTDSPL2Q05D32 466 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 ADGRA1Q86SQ6 560 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 RAI14Q9P0K7 980 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 TDO2P48775 406 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 FAM196AQ6ZSG2 479 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 TRIM44Q96DX7 344 aaPredicted RBP28.77■■■□□ 2.2
VRK2-202ENST00000412104 TMEM87BQ96K49 555 aa28.77■■■□□ 2.2
VRK2-202ENST00000412104 CFAP45Q9UL16 551 aa28.76■■■□□ 2.19
VRK2-202ENST00000412104 KLRK1P26718 216 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 FBXO33Q7Z6M2 555 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 KLHL34Q8N239 644 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 BCL11BQ9C0K0 894 aaPredicted RBP28.75■■■□□ 2.19
VRK2-202ENST00000412104 INCENPQ9NQS7 918 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 TACC3Q9Y6A5 838 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 GOLGA6L4A6NEF3 574 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 CPLX1O14810 134 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 ADD1P35611 737 aaKnown RBP28.75■■■□□ 2.19
VRK2-202ENST00000412104 GUCY1B3Q02153 619 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 AKNAD1Q5T1N1 836 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 ANKRD2Q9GZV1 360 aa28.75■■■□□ 2.19
VRK2-202ENST00000412104 RRAGDQ9NQL2 400 aaPredicted RBP28.75■■■□□ 2.19
VRK2-202ENST00000412104 LIG1P18858 919 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms