RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
LIMS1-205ENST00000410093 UBE4AQ14139 1066 aa15.98■□□□□ 0.15
LIMS1-205ENST00000410093 NARFQ9UHQ1 456 aa15.98■□□□□ 0.15
LIMS1-205ENST00000410093 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
LIMS1-205ENST00000410093 MYH15Q9Y2K3 1946 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 H3BQV1 296 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 PDE6AP16499 860 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 RFC4P35249 363 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 PHKA1P46020 1223 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 GPR162Q16538 588 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 ANKRD18AQ8IVF6 992 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 MTA3Q9BTC8 594 aa15.97■□□□□ 0.15
LIMS1-205ENST00000410093 PUS7LQ9H0K6 701 aaKnown RBP15.97■□□□□ 0.15
LIMS1-205ENST00000410093 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
LIMS1-205ENST00000410093 CHGBP05060 677 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 ADRA2BP18089 450 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 YY1P25490 414 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 SCRN1Q12765 414 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 UVSSAQ2YD98 709 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 HS1BP3Q53T59 392 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 TRIM44Q96DX7 344 aaPredicted RBP15.96■□□□□ 0.15
LIMS1-205ENST00000410093 TCEANC2Q96MN5 208 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 TSPY26PQ9H489 355 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 CHD4Q14839 1912 aa15.96■□□□□ 0.15
LIMS1-205ENST00000410093 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
LIMS1-205ENST00000410093 PDS5AQ29RF7 1337 aaKnown RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 ZNF532Q9HCE3 1301 aa15.95■□□□□ 0.14
LIMS1-205ENST00000410093 TCRBV5S4A2TA0A5A2 114 aa15.95■□□□□ 0.14
LIMS1-205ENST00000410093 PATL2C9JE40 543 aaKnown RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 SEMA3EO15041 775 aa15.95■□□□□ 0.14
LIMS1-205ENST00000410093 IDH1O75874 414 aaKnown RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 PDIA3P30101 505 aaKnown RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 DNM1Q05193 864 aaKnown RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
LIMS1-205ENST00000410093 MB21D2Q8IYB1 491 aaPredicted RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
LIMS1-205ENST00000410093 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
LIMS1-205ENST00000410093 CNNM2Q9H8M5 875 aa15.95■□□□□ 0.14
LIMS1-205ENST00000410093 SYCE3A1L190 88 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 FOXP2O15409 715 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 STK3Q13188 491 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 PIH1D3Q9NQM4 214 aaKnown RBP15.94■□□□□ 0.14
LIMS1-205ENST00000410093 ZNF804BA4D1E1 1349 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 FIBPO43427 364 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 ZPR1O75312 459 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 CHRNDQ07001 517 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 CDC37L1Q7L3B6 337 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 NLGN1Q8N2Q7 840 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 STRBPQ96SI9 672 aaKnown RBP15.94■□□□□ 0.14
LIMS1-205ENST00000410093 SETDB2Q96T68 719 aa15.94■□□□□ 0.14
LIMS1-205ENST00000410093 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
LIMS1-205ENST00000410093 TIAM2Q8IVF5 1701 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 PRC1O43663 620 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
LIMS1-205ENST00000410093 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
LIMS1-205ENST00000410093 APOBRQ0VD83 1088 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 RASGRF1Q13972 1273 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 CAVIN4Q5BKX8 364 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 ARHGEF1Q92888 912 aaKnown RBP15.93■□□□□ 0.14
LIMS1-205ENST00000410093 ANKRD2Q9GZV1 360 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 NSFL1CQ9UNZ2 370 aaKnown RBP15.93■□□□□ 0.14
LIMS1-205ENST00000410093 CD2APQ9Y5K6 639 aa15.93■□□□□ 0.14
LIMS1-205ENST00000410093 PTPDC1A2A3K4 754 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 CDKL5O76039 1030 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 RESTQ13127 1097 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 CPLX2Q6PUV4 134 aaKnown RBP15.92■□□□□ 0.14
LIMS1-205ENST00000410093 PI16Q6UXB8 463 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 TPTE2Q6XPS3 522 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 ZNF396Q96N95 335 aaPredicted RBP15.92■□□□□ 0.14
LIMS1-205ENST00000410093 NLRP3Q96P20 1036 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 KRT23Q9C075 422 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 GDPD2Q9HCC8 539 aa15.92■□□□□ 0.14
LIMS1-205ENST00000410093 NT5C2P49902 561 aa15.91■□□□□ 0.14
LIMS1-205ENST00000410093 COL9A3Q14050 684 aaPredicted RBP15.91■□□□□ 0.14
LIMS1-205ENST00000410093 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
LIMS1-205ENST00000410093 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
LIMS1-205ENST00000410093 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
LIMS1-205ENST00000410093 DENND2AQ9ULE3 1009 aa15.91■□□□□ 0.14
LIMS1-205ENST00000410093 ANGEL1Q9UNK9 670 aaKnown RBP15.91■□□□□ 0.14
LIMS1-205ENST00000410093 FAM177BA6PVY3 158 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 JAK2O60674 1132 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 APPP05067 770 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 PCP11498 1178 aaKnown RBP15.9■□□□□ 0.14
LIMS1-205ENST00000410093 FOXD4L6Q3SYB3 417 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-205ENST00000410093 FOXD4L3Q6VB84 417 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-205ENST00000410093 MAGEB6Q8N7X4 407 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 HELBQ8NG08 1087 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-205ENST00000410093 CHAMP1Q96JM3 812 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms