RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 TRAK1Q9UPV9 953 aa5.9□□□□□ -1.46
R3HDM1-204ENST00000410054 TTLL3Q9Y4R7 772 aa5.9□□□□□ -1.46
R3HDM1-204ENST00000410054 SCRIBQ14160 1630 aa5.9□□□□□ -1.46
R3HDM1-204ENST00000410054 BIN1O00499 593 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 RANBP6O60518 1105 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 PPFIA4O75335 1185 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 TOP1P11387 765 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 HNRNPUL2Q1KMD3 747 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 SLC44A4Q53GD3 710 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 RILPL1Q5EBL4 403 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 TUBA3EQ6PEY2 450 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 INTS8Q75QN2 995 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 CCDC150Q8NCX0 1101 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 PIBF1Q8WXW3 757 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 RPGRIP1Q96KN7 1286 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 SPZ1Q9BXG8 430 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 PLCB1Q9NQ66 1216 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 KIAA1468Q9P260 1216 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 USH1CQ9Y6N9 552 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 TARSL2A2RTX5 802 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 GOLGA8JA6NMD2 632 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 GOLGA8TH3BQL2 631 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 GUCY1B2O75343 617 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 GOLGA8HP0CJ92 632 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 PTGS2P35354 604 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 MAGEA8P43361 318 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 CCDC14Q49A88 953 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 CTCFLQ8NI51 663 aaPredicted RBP5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 CASP10Q92851 521 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 HAUS7Q99871 368 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 STK38LQ9Y2H1 464 aa5.9□□□□□ -1.47
R3HDM1-204ENST00000410054 WASHC2AQ641Q2 1341 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 PARNO95453 639 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 HAND2P61296 217 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 DHX8Q14562 1220 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 NOLC1Q14978 699 aaKnown RBP eCLIP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 PARP10Q53GL7 1025 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 CCDC93Q567U6 631 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 HABP4Q5JVS0 413 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 TBC1D22AQ8WUA7 517 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 LZTS2Q9BRK4 669 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 MAF1Q9H063 256 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 VRTNQ9H8Y1 702 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 H3BQV1 296 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 TSC22D2O75157 780 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 KRT75O95678 551 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 STMN1P16949 149 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 PMS1P54277 932 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 CALCOCO2Q13137 446 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 PDE3BQ13370 1112 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 ST13P5Q8NFI4 369 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 ZNF483Q8TF39 744 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 THUMPD2Q9BTF0 503 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 EIF2AQ9BY44 585 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 TBC1D2Q9BYX2 928 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 EDEM3Q9BZQ6 932 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 NAT10Q9H0A0 1025 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 CSRNP2Q9H175 543 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 LUC7L3O95232 432 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 BAG2O95816 211 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 NAT2P11245 290 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 KRT17Q04695 432 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 IFFO1Q0D2I5 559 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 RAPGEF1Q13905 1077 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 CFAP100Q494V2 611 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 NME8Q8N427 588 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 GABPB2Q8TAK5 448 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 CGNL1Q0VF96 1302 aa5.89□□□□□ -1.47
R3HDM1-204ENST00000410054 SYNDIG1LA6NDD5 238 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 AXIN1O15169 862 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CETN3O15182 167 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 EEF2P13639 858 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 LONP1P36776 959 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 TMED10P49755 219 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 GRAMD1BQ3KR37 738 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 GNPTABQ3T906 1256 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 ARHGAP29Q52LW3 1261 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 SLC30A9Q6PML9 568 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 DCLK2Q8N568 766 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 OSBPL9Q96SU4 736 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 ARPC5LQ9BPX5 153 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 PRDM5Q9NQX1 630 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 RASAL2Q9UJF2 1139 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 FAM50BQ9Y247 325 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 SSX2IPQ9Y2D8 614 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 BAZ1BQ9UIG0 1483 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 RNF40O75150 1001 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 STAM2O75886 525 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 RHOBTB1O94844 696 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 YEATS4O95619 227 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 ADCY5O95622 1261 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 VIL1P09327 827 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 FAM200BP0CF97 657 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 EIF2S2P20042 333 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 CCND1P24385 295 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 COBLL1Q53SF7 1204 aa5.88□□□□□ -1.47
R3HDM1-204ENST00000410054 TMEM87AQ8NBN3 555 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms