RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CKAP2LQ8IYA6 745 aa6.91□□□□□ -1.3
LSM5-205ENST00000409952 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
LSM5-205ENST00000409952 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 NEFLP07196 543 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 C8orf34Q49A92 452 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 CCDC181Q5TID7 509 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 ADAMTSL4Q6UY14 1074 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 FBXO11Q86XK2 927 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.3
LSM5-205ENST00000409952 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 PBX4Q9BYU1 374 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 RBSNQ9H1K0 784 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 DNAJC25Q9H1X3 360 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
LSM5-205ENST00000409952 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
LSM5-205ENST00000409952 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
LSM5-205ENST00000409952 TM4SF5O14894 197 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 DEAF1O75398 565 aaPredicted RBP6.89□□□□□ -1.31
LSM5-205ENST00000409952 SELPP16109 830 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 RAC1P63000 192 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 ATP11AP98196 1134 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 WFDC8Q8IUA0 241 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 SNX29Q8TEQ0 813 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
LSM5-205ENST00000409952 GPRASP2Q96D09 838 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 KLHL42Q9P2K6 505 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 TRIM33Q9UPN9 1127 aa6.89□□□□□ -1.31
LSM5-205ENST00000409952 USP31Q70CQ4 1352 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 ENPP3O14638 875 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 GIPC1O14908 333 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 CES1P23141 567 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 PAK2Q13177 524 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 ORC1Q13415 861 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 SERINC3Q13530 473 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 GRIK4Q16099 956 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 MKL1Q969V6 931 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 NACC1Q96RE7 527 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 DZANK1Q9NVP4 752 aa6.88□□□□□ -1.31
LSM5-205ENST00000409952 DLL1O00548 723 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 ITGB7P26010 798 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 ADGRE1Q14246 886 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 IL22RA1Q8N6P7 574 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 TTC16Q8NEE8 873 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 POP1Q99575 1024 aaKnown RBP6.87□□□□□ -1.31
LSM5-205ENST00000409952 C12orf49Q9H741 205 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 KANSL3Q9P2N6 904 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 FOXD3Q9UJU5 478 aaPredicted RBP6.87□□□□□ -1.31
LSM5-205ENST00000409952 COL4A3BPQ9Y5P4 624 aa6.87□□□□□ -1.31
LSM5-205ENST00000409952 C9orf172C9J069 976 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 EREGO14944 169 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 PHACTR2O75167 634 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 SMNDC1O75940 238 aaKnown RBP eCLIP6.86□□□□□ -1.31
LSM5-205ENST00000409952 ST13P50502 369 aaKnown RBP6.86□□□□□ -1.31
LSM5-205ENST00000409952 TAF1CQ15572 869 aaPredicted RBP6.86□□□□□ -1.31
LSM5-205ENST00000409952 NCAPG2Q86XI2 1143 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 Q8N3U1 123 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 RASGRP4Q8TDF6 673 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 SUGT1Q9Y2Z0 365 aa6.86□□□□□ -1.31
LSM5-205ENST00000409952 PLEKHD1A6NEE1 506 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 CPNE3O75131 537 aaKnown RBP6.85□□□□□ -1.31
LSM5-205ENST00000409952 APBA3O96018 575 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 FURINP09958 794 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 ACPPP15309 386 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
LSM5-205ENST00000409952 PEAR1Q5VY43 1037 aaPredicted RBP6.85□□□□□ -1.31
LSM5-205ENST00000409952 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 GDF6Q6KF10 455 aaPredicted RBP6.85□□□□□ -1.31
LSM5-205ENST00000409952 ERMP1Q7Z2K6 904 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
LSM5-205ENST00000409952 SEC16BQ96JE7 1060 aa6.85□□□□□ -1.31
LSM5-205ENST00000409952 EDN3P14138 238 aa6.84□□□□□ -1.31
LSM5-205ENST00000409952 IGF2-ASQ6U949 168 aa6.84□□□□□ -1.31
LSM5-205ENST00000409952 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
LSM5-205ENST00000409952 FILIP1Q7Z7B0 1213 aa6.84□□□□□ -1.31
LSM5-205ENST00000409952 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
LSM5-205ENST00000409952 PCDH12Q9NPG4 1184 aa6.84□□□□□ -1.31
LSM5-205ENST00000409952 IFT57Q9NWB7 429 aa6.84□□□□□ -1.31
LSM5-205ENST00000409952 DNAJC6O75061 913 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM5-205ENST00000409952 CDC27P30260 824 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 GATA4P43694 442 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 NRG1Q02297 640 aaPredicted RBP6.83□□□□□ -1.32
LSM5-205ENST00000409952 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 MEI1Q5TIA1 1274 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 GALNT12Q8IXK2 581 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 NXPE3Q969Y0 559 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 HHIPQ96QV1 700 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 SSBP4Q9BWG4 385 aaPredicted RBP6.83□□□□□ -1.32
LSM5-205ENST00000409952 SIRPGQ9P1W8 387 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 FAM8A1Q9UBU6 413 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
LSM5-205ENST00000409952 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms