RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
LIMS2-207ENST00000409808 HMGN5P82970 282 aaKnown RBP23.27■■□□□ 1.32
LIMS2-207ENST00000409808 TOB2Q14106 344 aaPredicted RBP23.27■■□□□ 1.32
LIMS2-207ENST00000409808 TAF6LQ9Y6J9 622 aa23.27■■□□□ 1.32
LIMS2-207ENST00000409808 MAP3K11Q16584 847 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 ZNF512BQ96KM6 892 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-207ENST00000409808 U3KPZ7 1027 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-207ENST00000409808 GOLGA6L6A8MZA4 724 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 SERPINB2P05120 415 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 CDC37L1Q7L3B6 337 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 FBXO41Q8TF61 875 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 NUP62CLQ9H1M0 184 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 PIH1D3Q9NQM4 214 aaKnown RBP23.26■■□□□ 1.31
LIMS2-207ENST00000409808 SPTLC3Q9NUV7 552 aa23.26■■□□□ 1.31
LIMS2-207ENST00000409808 M0R2C6 588 aa23.25■■□□□ 1.31
LIMS2-207ENST00000409808 DDR1Q08345 913 aa23.25■■□□□ 1.31
LIMS2-207ENST00000409808 OSBP2Q969R2 916 aa23.25■■□□□ 1.31
LIMS2-207ENST00000409808 COL23A1Q86Y22 540 aaPredicted RBP23.25■■□□□ 1.31
LIMS2-207ENST00000409808 HELLSQ9NRZ9 838 aa23.25■■□□□ 1.31
LIMS2-207ENST00000409808 DDX19AQ9NUU7 478 aaKnown RBP23.25■■□□□ 1.31
LIMS2-207ENST00000409808 TNS1Q9HBL0 1735 aaKnown RBP23.25■■□□□ 1.31
LIMS2-207ENST00000409808 MAST3O60307 1309 aa23.24■■□□□ 1.31
LIMS2-207ENST00000409808 RASGRF1Q13972 1273 aa23.24■■□□□ 1.31
LIMS2-207ENST00000409808 COL9A3Q14050 684 aaPredicted RBP23.24■■□□□ 1.31
LIMS2-207ENST00000409808 FAM200AQ8TCP9 573 aa23.24■■□□□ 1.31
LIMS2-207ENST00000409808 IQSEC3Q9UPP2 1182 aaPredicted RBP23.24■■□□□ 1.31
LIMS2-207ENST00000409808 UQCRFS1P1P0C7P4 283 aa23.24■■□□□ 1.31
LIMS2-207ENST00000409808 NEK1Q96PY6 1258 aa23.24■■□□□ 1.31
LIMS2-207ENST00000409808 MYH7P12883 1935 aa23.24■■□□□ 1.31
LIMS2-207ENST00000409808 GOLGA6L4A6NEF3 574 aa23.23■■□□□ 1.31
LIMS2-207ENST00000409808 WASHC4Q2M389 1173 aa23.23■■□□□ 1.31
LIMS2-207ENST00000409808 DNTTIP2Q5QJE6 756 aaKnown RBP23.23■■□□□ 1.31
LIMS2-207ENST00000409808 GYG1P46976 350 aa23.22■■□□□ 1.31
LIMS2-207ENST00000409808 TPRNQ4KMQ1 711 aa23.22■■□□□ 1.31
LIMS2-207ENST00000409808 SPATA5Q8NB90 893 aa23.22■■□□□ 1.31
LIMS2-207ENST00000409808 MYRIPQ8NFW9 859 aa23.22■■□□□ 1.31
LIMS2-207ENST00000409808 SPATA32Q96LK8 384 aa23.22■■□□□ 1.31
LIMS2-207ENST00000409808 IDH1O75874 414 aaKnown RBP23.21■■□□□ 1.31
LIMS2-207ENST00000409808 GTF3C6Q969F1 213 aa23.21■■□□□ 1.31
LIMS2-207ENST00000409808 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
LIMS2-207ENST00000409808 KLRK1P26718 216 aa23.21■■□□□ 1.31
LIMS2-207ENST00000409808 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
LIMS2-207ENST00000409808 PUS7LQ9H0K6 701 aaKnown RBP23.21■■□□□ 1.31
LIMS2-207ENST00000409808 ZSCAN16Q9H4T2 348 aaPredicted RBP23.21■■□□□ 1.31
LIMS2-207ENST00000409808 TTC12Q9H892 705 aaPredicted RBP23.21■■□□□ 1.31
LIMS2-207ENST00000409808 HMGB1P09429 215 aaKnown RBP23.2■■□□□ 1.3
LIMS2-207ENST00000409808 ZNF830Q96NB3 372 aaPredicted RBP23.2■■□□□ 1.3
LIMS2-207ENST00000409808 TNMDQ9H2S6 317 aa23.2■■□□□ 1.3
LIMS2-207ENST00000409808 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
LIMS2-207ENST00000409808 FERMT3Q86UX7 667 aa23.2■■□□□ 1.3
LIMS2-207ENST00000409808 LEO1Q8WVC0 666 aaPredicted RBP23.2■■□□□ 1.3
LIMS2-207ENST00000409808 LLPHQ9BRT6 129 aaKnown RBP23.2■■□□□ 1.3
LIMS2-207ENST00000409808 RBM10P98175 930 aaKnown RBP23.19■■□□□ 1.3
LIMS2-207ENST00000409808 TYRO3Q06418 890 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 UBE4AQ14139 1066 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 SLC9C2Q5TAH2 1124 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 CAVIN2O95810 425 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 LIG1P18858 919 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 ST5P78524 1137 aa23.19■■□□□ 1.3
LIMS2-207ENST00000409808 ZFYP08048 801 aaPredicted RBP23.18■■□□□ 1.3
LIMS2-207ENST00000409808 HSPD1P10809 573 aaKnown RBP23.18■■□□□ 1.3
LIMS2-207ENST00000409808 TTF1Q15361 905 aaPredicted RBP23.18■■□□□ 1.3
LIMS2-207ENST00000409808 CLSTN2Q9H4D0 955 aa23.18■■□□□ 1.3
LIMS2-207ENST00000409808 MRVI1Q9Y6F6 885 aa23.18■■□□□ 1.3
LIMS2-207ENST00000409808 GTF2F1P35269 517 aaKnown RBP eCLIP23.17■■□□□ 1.3
LIMS2-207ENST00000409808 ADD2P35612 726 aa23.17■■□□□ 1.3
LIMS2-207ENST00000409808 EN1Q05925 392 aaPredicted RBP23.17■■□□□ 1.3
LIMS2-207ENST00000409808 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
LIMS2-207ENST00000409808 TCEANC2Q96MN5 208 aa23.17■■□□□ 1.3
LIMS2-207ENST00000409808 CFAP45Q9UL16 551 aa23.17■■□□□ 1.3
LIMS2-207ENST00000409808 PLCB2Q00722 1185 aa23.17■■□□□ 1.3
LIMS2-207ENST00000409808 EZH2Q15910 746 aaKnown RBP23.17■■□□□ 1.3
LIMS2-207ENST00000409808 APPBP2Q92624 585 aa23.17■■□□□ 1.3
LIMS2-207ENST00000409808 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.17■■□□□ 1.3
LIMS2-207ENST00000409808 AP5Z1O43299 807 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 GRAPQ13588 217 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
LIMS2-207ENST00000409808 KIAA1524Q8TCG1 905 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 RPGRQ92834 1020 aaKnown RBP23.16■■□□□ 1.3
LIMS2-207ENST00000409808 CHMP4CQ96CF2 233 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 DACT1Q9NYF0 836 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 CYP21A2P08686 494 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 FAM84BQ96KN1 310 aaPredicted RBP23.16■■□□□ 1.3
LIMS2-207ENST00000409808 PNPLA7Q6ZV29 1317 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 ZNF532Q9HCE3 1301 aa23.16■■□□□ 1.3
LIMS2-207ENST00000409808 RESTQ13127 1097 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 STK3Q13188 491 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 Q6ZUG5 572 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 FOXP2O15409 715 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 PDE6AP16499 860 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 FAM173BQ6P4H8 233 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 KIF3AQ9Y496 699 aa23.15■■□□□ 1.3
LIMS2-207ENST00000409808 DTNBO60941 627 aa23.14■■□□□ 1.3
LIMS2-207ENST00000409808 TTLL5Q6EMB2 1281 aa23.14■■□□□ 1.3
LIMS2-207ENST00000409808 SMARCC2Q8TAQ2 1214 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms