RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 SELENOOQ9BVL4 669 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 MBIPQ9NS73 344 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 CFBP00751 764 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 CCT6AP40227 531 aaKnown RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 UBXN1Q04323 297 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 TFCP2Q12800 502 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 WDR44Q5JSH3 913 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 PDCL2Q8N4E4 241 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 SCNN1DP51172 638 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 GNG11P61952 73 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 NPHP3Q7Z494 1330 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 CAMSAP2Q08AD1 1489 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 MAN1A1P33908 653 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 NAA25Q14CX7 972 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 C6orf163Q5TEZ5 329 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 RIOK1Q9BRS2 568 aaKnown RBP9.48□□□□□ -0.89
SCN9A-203ENST00000409672 VWA3AA6NCI4 1184 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 GRM8O00222 908 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
SCN9A-203ENST00000409672 CEP112Q8N8E3 955 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 XRCC6P12956 609 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCN9A-203ENST00000409672 STX1AQ16623 288 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 ARPP19P56211 112 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 KRT79Q5XKE5 535 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 TBC1D31Q96DN5 1066 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 AK9Q5TCS8 1911 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 STX10O60499 249 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 CKAP4Q07065 602 aaKnown RBP9.48□□□□□ -0.89
SCN9A-203ENST00000409672 IFI16Q16666 785 aaKnown RBP9.48□□□□□ -0.89
SCN9A-203ENST00000409672 ARMT1Q9H993 441 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 PRDM5Q9NQX1 630 aaPredicted RBP9.48□□□□□ -0.89
SCN9A-203ENST00000409672 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 ADGRL1O94910 1474 aa9.48□□□□□ -0.89
SCN9A-203ENST00000409672 KARSQ15046 597 aaKnown RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 SEPT14Q6ZU15 432 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 DCPSQ96C86 337 aaKnown RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 PLEKHA4Q9H4M7 779 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 PRPF6O94906 941 aaKnown RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 DTHD1Q6ZMT9 781 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 RYBPQ8N488 228 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 MICAL1Q8TDZ2 1067 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 LEO1Q8WVC0 666 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 AZI2Q9H6S1 392 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 AAMPQ13685 434 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 IFT74Q96LB3 600 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 LRRC27Q9C0I9 530 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 BICC1Q9H694 974 aaKnown RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 SEPT10Q9P0V9 454 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 HSPA1LP34931 641 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 GLG1Q92896 1179 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 MEIS3Q99687 375 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 SCAND2PQ9GZW5 306 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 FRMPD2Q68DX3 1309 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 BAG6P46379 1132 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 DCLK2Q8N568 766 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 CNPY2Q9Y2B0 182 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 HECW1Q76N89 1606 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 TRIM37O94972 964 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 MCMDC2Q4G0Z9 681 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 GTF2F1P35269 517 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC14Q49A88 953 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC129Q6ZRS4 1044 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 POLIQ9UNA4 740 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
SCN9A-203ENST00000409672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCN9A-203ENST00000409672 LRMPQ12912 555 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 SNW1Q13573 536 aaKnown RBP9.46□□□□□ -0.89
SCN9A-203ENST00000409672 PLVAPQ9BX97 442 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.89
SCN9A-203ENST00000409672 ADCY5O95622 1261 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 ACRBPQ8NEB7 543 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 NEK11Q8NG66 645 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 CFAP57Q96MR6 1250 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 KIAA1107Q9UPP5 1409 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 GMNNO75496 209 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 OATP04181 439 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 KCNQ4P56696 695 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 MMS19Q96T76 1030 aa9.46□□□□□ -0.89
SCN9A-203ENST00000409672 PRDM1O75626 825 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 NAP1L3Q99457 506 aaPredicted RBP9.46□□□□□ -0.9
SCN9A-203ENST00000409672 GBP3Q9H0R5 595 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 RMND1Q9NWS8 449 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 ANAPC4Q9UJX5 808 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 TXKP42681 527 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 RSPH3Q86UC2 560 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms