RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 RTEL1Q9NZ71 1219 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 HDAC9Q9UKV0 1011 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CNPY2Q9Y2B0 182 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 FPGT-TNNI3KV9GXZ4 949 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 USP6P35125 1406 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 KIAA0232Q92628 1395 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 SBNO2Q9Y2G9 1366 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CTAGE5O15320 804 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 PRC1O43663 620 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 TNNT3P45378 269 aaPredicted RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 EIF4A1P60842 406 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 STX1AQ16623 288 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC178Q5BJE1 867 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 HEATR3Q7Z4Q2 680 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 FAM89AQ96GI7 184 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 LUC7LQ9NQ29 371 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 RAD50Q92878 1312 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC181Q5TID7 509 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 RUFY3Q7L099 469 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CNBD1Q8NA66 436 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 ZNF397Q8NF99 534 aaPredicted RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 ERCC4Q92889 916 aaPredicted RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 HELLSQ9NRZ9 838 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 DDX19AQ9NUU7 478 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 TFIP11Q9UBB9 837 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 TAF6LQ9Y6J9 622 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 ALKQ9UM73 1620 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 SETQ01105 290 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PPP4R3AQ6IN85 833 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 FILIP1Q7Z7B0 1213 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 KLHDC4Q8TBB5 520 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 OTUD7AQ8TE49 926 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CALML4Q96GE6 196 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ZNF594Q96JF6 807 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ALG1Q9BT22 464 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 HSD3B7Q9H2F3 369 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 USP21Q9UK80 565 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 INO80Q9ULG1 1556 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 KIF24Q5T7B8 1368 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 A0A0U1RQJ8 604 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CTIFO43310 598 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PDE8AO60658 829 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PHKG2P15735 406 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PRIM1P49642 420 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CDR1P51861 262 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 AK2P54819 239 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ARID5BQ14865 1188 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PUM3Q15397 648 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 SKIDA1Q1XH10 827 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC129Q6ZRS4 1044 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CHST3Q7LGC8 479 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 KIAA1328Q86T90 577 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 SMC5Q8IY18 1101 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC191Q8NCU4 936 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ATRIPQ8WXE1 791 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 SNX21Q969T3 373 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 SCLT1Q96NL6 688 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ZSCAN16Q9H4T2 348 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CLIP2Q9UDT6 1046 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 SLIT1O75093 1534 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 EPB41L2O43491 1005 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PPP1R12BO60237 982 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 A1BGP04217 495 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 HCLS1P14317 486 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 U2AF2P26368 475 aaKnown RBP eCLIP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 RDXP35241 583 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CHMP4BP1P59074 171 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 APOBRQ0VD83 1088 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ZSCAN23Q3MJ62 389 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PARP10Q53GL7 1025 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 HSP90B2PQ58FF3 399 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 XAGE2Q96GT9 111 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 DENND2AQ9ULE3 1009 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 AOX1Q06278 1338 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ERVV-2B6SEH9 535 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 BIN1O00499 593 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 KCNQ3O43525 872 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 LDHBP07195 334 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 IBSPP21815 317 aaPredicted RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 UBE2HP62256 183 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 KCNV1Q6PIU1 500 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 SAP30BPQ9UHR5 308 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 A0A1B0GUL7 405 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 EYA2O00167 538 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 UFL1O94874 794 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 MBD4O95243 580 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 F13A1P00488 732 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 POLD1P28340 1107 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC112Q8NEF3 446 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 IPO4Q8TEX9 1081 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 ZCCHC17Q9NP64 241 aaKnown RBP4.35□□□□□ -1.71
RGPD4-201ENST00000408999 PICK1Q9NRD5 415 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 MCM9Q9NXL9 1143 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 WWC3Q9ULE0 1092 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 STX8Q9UNK0 236 aa4.35□□□□□ -1.71
RGPD4-201ENST00000408999 IFT172Q9UG01 1749 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 A2ML1A8K2U0 1454 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 CDK12Q9NYV4 1490 aaPredicted RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 MYH8P13535 1937 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms