RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 ZNF213O14771 459 aa21.47■■□□□ 1.03
EWSR1-207ENST00000406548 PCCAP05165 728 aaPredicted RBP21.47■■□□□ 1.03
EWSR1-207ENST00000406548 TRIM28Q13263 835 aaKnown RBP21.47■■□□□ 1.03
EWSR1-207ENST00000406548 RAB11FIP4Q86YS3 637 aa21.47■■□□□ 1.03
EWSR1-207ENST00000406548 BPIFA3Q9BQP9 254 aa21.47■■□□□ 1.03
EWSR1-207ENST00000406548 ZRSR1Q15695 479 aaKnown RBP21.47■■□□□ 1.03
EWSR1-207ENST00000406548 DPCR1Q3MIW9 517 aa21.47■■□□□ 1.03
EWSR1-207ENST00000406548 KIF28PB7ZC32 967 aa21.46■■□□□ 1.03
EWSR1-207ENST00000406548 GSDMDP57764 484 aa21.46■■□□□ 1.03
EWSR1-207ENST00000406548 CBX1P83916 185 aa21.46■■□□□ 1.03
EWSR1-207ENST00000406548 IFIT5Q13325 482 aaKnown RBP21.46■■□□□ 1.03
EWSR1-207ENST00000406548 PI16Q6UXB8 463 aa21.46■■□□□ 1.03
EWSR1-207ENST00000406548 NYAP1Q6ZVC0 841 aa21.46■■□□□ 1.03
EWSR1-207ENST00000406548 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
EWSR1-207ENST00000406548 CSF1RP07333 972 aa21.45■■□□□ 1.03
EWSR1-207ENST00000406548 IL2RBP14784 551 aa21.45■■□□□ 1.03
EWSR1-207ENST00000406548 KIF23Q02241 960 aaPredicted RBP21.45■■□□□ 1.03
EWSR1-207ENST00000406548 SYNE3Q6ZMZ3 975 aa21.45■■□□□ 1.03
EWSR1-207ENST00000406548 FAM89AQ96GI7 184 aa21.45■■□□□ 1.03
EWSR1-207ENST00000406548 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.03
EWSR1-207ENST00000406548 TOGARAM1Q9Y4F4 1720 aa21.45■■□□□ 1.02
EWSR1-207ENST00000406548 NBPF11Q86T75 865 aa21.45■■□□□ 1.02
EWSR1-207ENST00000406548 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.45■■□□□ 1.028e-7■□□□□ 10.7
EWSR1-207ENST00000406548 GJB4Q9NTQ9 266 aa21.45■■□□□ 1.02
EWSR1-207ENST00000406548 AKAP11Q9UKA4 1901 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 PTPN14Q15678 1187 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 ANO1Q5XXA6 986 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 KIF6Q6ZMV9 814 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 ZNF592Q92610 1267 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 OSBPL5Q9H0X9 879 aaPredicted RBP21.44■■□□□ 1.02
EWSR1-207ENST00000406548 ZBTB38Q8NAP3 1195 aaPredicted RBP21.44■■□□□ 1.02
EWSR1-207ENST00000406548 RGS22Q8NE09 1264 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 KCND1Q9NSA2 647 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 IMPACTQ9P2X3 320 aa21.44■■□□□ 1.02
EWSR1-207ENST00000406548 ATRNO75882 1429 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
EWSR1-207ENST00000406548 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.022e-12■■■■□ 20.7
EWSR1-207ENST00000406548 ZNF202O95125 648 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 MCAMP43121 646 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 METTL24Q5JXM2 366 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 AXDND1Q5T1B0 1012 aaPredicted RBP21.43■■□□□ 1.02
EWSR1-207ENST00000406548 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 CCAR2Q8N163 923 aaKnown RBP21.43■■□□□ 1.02
EWSR1-207ENST00000406548 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 PRDM4Q9UKN5 801 aa21.43■■□□□ 1.02
EWSR1-207ENST00000406548 ZMYM6O95789 1325 aa21.42■■□□□ 1.02
EWSR1-207ENST00000406548 PFKFB1P16118 471 aa21.42■■□□□ 1.02
EWSR1-207ENST00000406548 CMA1P23946 247 aa21.42■■□□□ 1.02
EWSR1-207ENST00000406548 NLRP12P59046 1061 aa21.42■■□□□ 1.02
EWSR1-207ENST00000406548 TRDNQ13061 729 aa21.42■■□□□ 1.02
EWSR1-207ENST00000406548 MROH7-TTC4A0A0A0MT08 1334 aa21.42■■□□□ 1.02
EWSR1-207ENST00000406548 ADD2P35612 726 aa21.41■■□□□ 1.02
EWSR1-207ENST00000406548 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
EWSR1-207ENST00000406548 ANGEL1Q9UNK9 670 aaKnown RBP21.41■■□□□ 1.02
EWSR1-207ENST00000406548 XPO4Q9C0E2 1151 aaKnown RBP21.41■■□□□ 1.02
EWSR1-207ENST00000406548 RIPOR2Q9Y4F9 1068 aa21.41■■□□□ 1.02
EWSR1-207ENST00000406548 ECM29Q5VYK3 1845 aa21.41■■□□□ 1.02
EWSR1-207ENST00000406548 CDHR2Q9BYE9 1310 aa21.41■■□□□ 1.02
EWSR1-207ENST00000406548 SMC2O95347 1197 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 ZSCAN20P17040 1043 aaPredicted RBP21.4■■□□□ 1.02
EWSR1-207ENST00000406548 TPM4P67936 248 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 TBC1D10CQ8IV04 446 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 TMOD3Q9NYL9 352 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 SPDYE4A6NLX3 237 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 BIN1O00499 593 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 SLC39A14Q15043 492 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 CCDC150Q8NCX0 1101 aa21.4■■□□□ 1.02
EWSR1-207ENST00000406548 TRMT1Q9NXH9 659 aaKnown RBP21.4■■□□□ 1.02
EWSR1-207ENST00000406548 CGNQ9P2M7 1197 aaKnown RBP21.4■■□□□ 1.02
EWSR1-207ENST00000406548 SH2B2O14492 632 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-207ENST00000406548 CDKL5O76039 1030 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.01
EWSR1-207ENST00000406548 ZNF512BQ96KM6 892 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-207ENST00000406548 FEZ1Q99689 392 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 ALG1Q9BT22 464 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 IFNKQ9P0W0 207 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 DENND2AQ9ULE3 1009 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-207ENST00000406548 DMTNQ08495 405 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 NAA30Q147X3 362 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-207ENST00000406548 TTF1Q15361 905 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-207ENST00000406548 SLC9C2Q5TAH2 1124 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 LDHAL6AQ6ZMR3 332 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 CYB5R4Q7L1T6 521 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 DNAJC10Q8IXB1 793 aa21.39■■□□□ 1.01
EWSR1-207ENST00000406548 MYO5AQ9Y4I1 1855 aaKnown RBP21.38■■□□□ 1.01
EWSR1-207ENST00000406548 ITGA6P23229 1130 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 NCAPHQ15003 741 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 TMC6Q7Z403 805 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 VPS37DQ86XT2 251 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 TIGD1Q96MW7 591 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 AIFM3Q96NN9 605 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 TEX13AQ9BXU3 409 aaPredicted RBP21.38■■□□□ 1.01
EWSR1-207ENST00000406548 GREM2Q9H772 168 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 MYH3P11055 1940 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 MAP3K15Q6ZN16 1313 aa21.38■■□□□ 1.01
EWSR1-207ENST00000406548 KIF2AO00139 706 aaPredicted RBP21.37■■□□□ 1.01
EWSR1-207ENST00000406548 MARCKSP29966 332 aaPredicted RBP21.37■■□□□ 1.01
EWSR1-207ENST00000406548 UTP14CQ5TAP6 766 aaKnown RBP21.37■■□□□ 1.01
EWSR1-207ENST00000406548 SYNE4Q8N205 404 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms