RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, human

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-204	ENST00000405570	MAGEA9	P43362	315 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	APOBR	Q0VD83	1088 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	JAKMIP3	Q5VZ66	844 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	STOX1	Q6ZVD7	989 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	DHX58	Q96C10	678 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CHMP4C	Q96CF2	233 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CLIC4	Q9Y696	253 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SALL1	Q9NSC2	1324 aa		11.52	□□□□□ -0.57
CTNNB1-204	ENST00000405570	XIRP1	Q702N8	1843 aa	Known RBP	11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TMEM232	C9JQI7	657 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ZNF202	O95125	648 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SERPINC1	P01008	464 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CHGB	P05060	677 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.51	□□□□□ -0.57	7e-10	■■■□□ 16.4
CTNNB1-204	ENST00000405570	BRD3	Q15059	726 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CFAP100	Q494V2	611 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	NOM1	Q5C9Z4	860 aa	Known RBP	11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	MPRIP	Q6WCQ1	1025 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CCDC129	Q6ZRS4	1044 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	JRKL	Q9Y4A0	524 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TNS3	Q68CZ2	1445 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PXDN	Q92626	1479 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ALS2	Q96Q42	1657 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	RPS6KA5	O75582	802 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	EIF4A1	P60842	406 aa	Known RBP	11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	MCM6	Q14566	821 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SF3A1	Q15459	793 aa	Known RBP	11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570		U3KPZ7	1027 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	RGPD2	P0DJD1	1756 aa		11.51	□□□□□ -0.57
CTNNB1-204	ENST00000405570	EIF3CL	B5ME19	914 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CBFA2T2	O43439	604 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	N4BP1	O75113	896 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TOP1	P11387	765 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	GUCY2C	P25092	1073 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	STK38	Q15208	465 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TTC31	Q49AM3	519 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TOGARAM2	Q6ZUX3	1019 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	EIF3C	Q99613	913 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	NLRP2	Q9NX02	1062 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	GOLGA6L9	A6NEM1	432 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CWF19L2	Q2TBE0	894 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	DHX32	Q7L7V1	743 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TEX2	Q8IWB9	1127 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	KAZALD1	Q96I82	304 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ZSWIM4	Q9H7M6	989 aa		11.5	□□□□□ -0.57
CTNNB1-204	ENST00000405570	LOC102724159	A0A0B4J2E5	919 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	FDPS	P14324	419 aa	Known RBP	11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PWP2	Q15269	919 aa	Known RBP	11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	KCNG4	Q8TDN1	519 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	BAG1	Q99933	345 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ANKZF1	Q9H8Y5	726 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	BRMS1	Q9HCU9	246 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	INTS13	Q9NVM9	706 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	MAP3K2	Q9Y2U5	619 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SPTLC2	O15270	562 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	POLR3D	P05423	398 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CHRM1	P11229	460 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	MYL5	Q02045	173 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	OTUD7B	Q6GQQ9	843 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	HDX	Q7Z353	690 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SUCLG2	Q96I99	432 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	FAN1	Q9Y2M0	1017 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CARMIL3	Q8ND23	1372 aa		11.49	□□□□□ -0.57
CTNNB1-204	ENST00000405570	KCNQ3	O43525	872 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CSB-PGBD3	P0DP91	1061 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PFKFB1	P16118	471 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CHMP4BP1	P59074	171 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	BICC1	Q9H694	974 aa	Known RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SUGCT	Q9HAC7	445 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	POLR3E	Q9NVU0	708 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	NDUFB9	Q9Y6M9	179 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ZNF609	O15014	1411 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	STX10	O60499	249 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	YEATS4	O95619	227 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	HMGB1	P09429	215 aa	Known RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	HOXB7	P09629	217 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PDIA3	P30101	505 aa	Known RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	USP5	P45974	858 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CORO7	P57737	925 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	EXOSC10	Q01780	885 aa	Known RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TBX2	Q13207	712 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	AKAP4	Q5JQC9	854 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	KLHDC4	Q8TBB5	520 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	PNKP	Q96T60	521 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	AGXT2	Q9BYV1	514 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	TUBE1	Q9UJT0	475 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	L1RE1	Q9UN81	338 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	AKAP2	Q9Y2D5	859 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	NCAPD2	Q15021	1401 aa		11.48	□□□□□ -0.57
CTNNB1-204	ENST00000405570	ANKRD65	E5RJM6	399 aa		11.47	□□□□□ -0.57
CTNNB1-204	ENST00000405570	CUTA	O60888	179 aa		11.47	□□□□□ -0.57
CTNNB1-204	ENST00000405570	KARS	Q15046	597 aa	Known RBP	11.47	□□□□□ -0.57
CTNNB1-204	ENST00000405570	SRGAP1	Q7Z6B7	1085 aa		11.47	□□□□□ -0.57

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