RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 HMG20BQ9P0W2 317 aa23.61■■□□□ 1.37
RTN4-207ENST00000402434 DBNLQ9UJU6 430 aaKnown RBP23.61■■□□□ 1.37
RTN4-207ENST00000402434 MYO1BO43795 1136 aa23.6■■□□□ 1.37
RTN4-207ENST00000402434 UQCRFS1P1P0C7P4 283 aa23.6■■□□□ 1.37
RTN4-207ENST00000402434 PRDX5P30044 214 aa23.6■■□□□ 1.37
RTN4-207ENST00000402434 ZGPATQ8N5A5 531 aaKnown RBP23.6■■□□□ 1.37
RTN4-207ENST00000402434 TEKT1Q969V4 418 aa23.6■■□□□ 1.37
RTN4-207ENST00000402434 KLRG1Q96E93 195 aa23.6■■□□□ 1.37
RTN4-207ENST00000402434 CCDC158Q5M9N0 1113 aa23.59■■□□□ 1.37
RTN4-207ENST00000402434 HHIPL2Q6UWX4 724 aa23.59■■□□□ 1.37
RTN4-207ENST00000402434 APOBEC3FQ8IUX4 373 aaKnown RBP23.59■■□□□ 1.37
RTN4-207ENST00000402434 SPATA5Q8NB90 893 aa23.59■■□□□ 1.37
RTN4-207ENST00000402434 ZDHHC15Q96MV8 337 aa23.59■■□□□ 1.37
RTN4-207ENST00000402434 CCDC8Q9H0W5 538 aaPredicted RBP23.59■■□□□ 1.37
RTN4-207ENST00000402434 SCAF8Q9UPN6 1271 aaKnown RBP23.59■■□□□ 1.37
RTN4-207ENST00000402434 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
RTN4-207ENST00000402434 AOX1Q06278 1338 aa23.59■■□□□ 1.37
RTN4-207ENST00000402434 LDHBP07195 334 aaKnown RBP23.58■■□□□ 1.37
RTN4-207ENST00000402434 MCAMP43121 646 aa23.58■■□□□ 1.37
RTN4-207ENST00000402434 TLR7Q9NYK1 1049 aaKnown RBP23.58■■□□□ 1.37
RTN4-207ENST00000402434 CDCA5Q96FF9 252 aa23.57■■□□□ 1.36
RTN4-207ENST00000402434 ZNF408Q9H9D4 720 aa23.57■■□□□ 1.36
RTN4-207ENST00000402434 IL1RAPL2Q9NP60 686 aa23.57■■□□□ 1.36
RTN4-207ENST00000402434 TLL2Q9Y6L7 1015 aa23.57■■□□□ 1.36
RTN4-207ENST00000402434 ECM29Q5VYK3 1845 aa23.57■■□□□ 1.36
RTN4-207ENST00000402434 RASSF10A6NK89 507 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 SPDYE2Q495Y8 402 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 PI16Q6UXB8 463 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 SAPCD2Q86UD0 394 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 AACSQ86V21 672 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 CLASRPQ8N2M8 674 aaKnown RBP23.56■■□□□ 1.36
RTN4-207ENST00000402434 DCTPP1Q9H773 170 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 CNTNAP1P78357 1384 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 CLRN2A0PK11 232 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 APBB1O00213 710 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 AAMPQ13685 434 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 TTC39AQ5SRH9 613 aa23.56■■□□□ 1.36
RTN4-207ENST00000402434 SPTY2D1Q68D10 685 aaPredicted RBP23.56■■□□□ 1.36
RTN4-207ENST00000402434 APOBEC3HQ6NTF7 200 aaKnown RBP23.56■■□□□ 1.36
RTN4-207ENST00000402434 TDRD3Q9H7E2 651 aaKnown RBP23.56■■□□□ 1.36
RTN4-207ENST00000402434 ABT1Q9ULW3 272 aaKnown RBP23.56■■□□□ 1.36
RTN4-207ENST00000402434 SUPT16HQ9Y5B9 1047 aaKnown RBP23.56■■□□□ 1.36
RTN4-207ENST00000402434 DEFB115Q30KQ5 88 aa23.55■■□□□ 1.36
RTN4-207ENST00000402434 DEFB129Q9H1M3 183 aa23.55■■□□□ 1.36
RTN4-207ENST00000402434 ZNF70Q9UC06 446 aaPredicted RBP23.55■■□□□ 1.36
RTN4-207ENST00000402434 ABCF2Q9UG63 623 aa23.55■■□□□ 1.36
RTN4-207ENST00000402434 DIXDC1Q155Q3 683 aa23.54■■□□□ 1.36
RTN4-207ENST00000402434 HHIPL1Q96JK4 782 aa23.54■■□□□ 1.36
RTN4-207ENST00000402434 GBA2Q9HCG7 927 aaPredicted RBP23.54■■□□□ 1.36
RTN4-207ENST00000402434 MKRN1Q9UHC7 482 aaKnown RBP23.54■■□□□ 1.36
RTN4-207ENST00000402434 PPP2R3BQ9Y5P8 575 aa23.54■■□□□ 1.36
RTN4-207ENST00000402434 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
RTN4-207ENST00000402434 PRAMEF18Q5VWM3 479 aa23.53■■□□□ 1.36
RTN4-207ENST00000402434 TBC1D9Q6ZT07 1266 aa23.52■■□□□ 1.36
RTN4-207ENST00000402434 C2orf69Q8N8R5 385 aa23.52■■□□□ 1.36
RTN4-207ENST00000402434 JMYQ8N9B5 988 aa23.52■■□□□ 1.36
RTN4-207ENST00000402434 FAM163AQ96GL9 167 aaPredicted RBP23.52■■□□□ 1.36
RTN4-207ENST00000402434 LRRCC1Q9C099 1032 aa23.52■■□□□ 1.36
RTN4-207ENST00000402434 VEZTQ9HBM0 779 aa23.52■■□□□ 1.36
RTN4-207ENST00000402434 DAGLAQ9Y4D2 1042 aa23.52■■□□□ 1.36
RTN4-207ENST00000402434 FKBP1BP68106 108 aa23.51■■□□□ 1.35
RTN4-207ENST00000402434 TNFAIP1Q13829 316 aa23.51■■□□□ 1.35
RTN4-207ENST00000402434 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
RTN4-207ENST00000402434 SNRKQ9NRH2 765 aa23.51■■□□□ 1.35
RTN4-207ENST00000402434 MECOMQ03112 1051 aa23.5■■□□□ 1.35
RTN4-207ENST00000402434 DZIP1Q86YF9 867 aaKnown RBP23.5■■□□□ 1.35
RTN4-207ENST00000402434 GAKO14976 1311 aa23.5■■□□□ 1.35
RTN4-207ENST00000402434 CYP2E1P05181 493 aaPredicted RBP23.49■■□□□ 1.35
RTN4-207ENST00000402434 IFIT2P09913 472 aaKnown RBP23.49■■□□□ 1.35
RTN4-207ENST00000402434 VEGFBP49765 207 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 RASA3Q14644 834 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 FKBP1CQ5VVH2 108 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 SLF2Q8IX21 1173 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 ZNF384Q8TF68 577 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 IGSF3O75054 1194 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 ZAP70P43403 619 aa23.49■■□□□ 1.35
RTN4-207ENST00000402434 NSUN4Q96CB9 384 aaKnown RBP23.49■■□□□ 1.35
RTN4-207ENST00000402434 NF2P35240 595 aa23.48■■□□□ 1.35
RTN4-207ENST00000402434 HUNKP57058 714 aa23.48■■□□□ 1.35
RTN4-207ENST00000402434 LRP2BPQ9P2M1 347 aa23.48■■□□□ 1.35
RTN4-207ENST00000402434 MYH2Q9UKX2 1941 aa23.47■■□□□ 1.35
RTN4-207ENST00000402434 CDC42EP5Q6NZY7 148 aa23.47■■□□□ 1.35
RTN4-207ENST00000402434 TCP10L2B9ZVM9 353 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 TNNI2P48788 182 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 CACNB3P54284 484 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 HDAC1Q13547 482 aaPredicted RBP23.46■■□□□ 1.35
RTN4-207ENST00000402434 FAM83AQ86UY5 434 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 EXOC6Q8TAG9 804 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.46■■□□□ 1.354e-6■■□□□ 11.4
RTN4-207ENST00000402434 TMOD2Q9NZR1 351 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 RAI14Q9P0K7 980 aa23.46■■□□□ 1.35
RTN4-207ENST00000402434 PAPPA2Q9BXP8 1791 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 SMARCA5O60264 1052 aaPredicted RBP23.45■■□□□ 1.34
RTN4-207ENST00000402434 ECE1P42892 770 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 GSTO1P78417 241 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 SUPT20HL1Q3ZLR7 823 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 CAPNS2Q96L46 248 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 TEPSINQ96N21 525 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 MROH7-TTC4A0A0A0MT08 1334 aa23.45■■□□□ 1.34
RTN4-207ENST00000402434 WDR33Q9C0J8 1336 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms