RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 NMRK2Q9NPI5 230 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 MAPK8IP3Q9UPT6 1336 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 ATP9BO43861 1147 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 LMNB1P20700 586 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 PIP4K2AP48426 406 aaPredicted RBP7.32□□□□□ -1.24
CLIP4-202ENST00000401605 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 SDE2Q6IQ49 451 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 RPAINQ86UA6 219 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 EPS8L1Q8TE68 723 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 SNRNP27Q8WVK2 155 aaKnown RBP7.32□□□□□ -1.24
CLIP4-202ENST00000401605 ZBTB9Q96C00 473 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 EVI5LQ96CN4 794 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 KIF13BQ9NQT8 1826 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 NBPF26B4DH59 902 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 TPM3P06753 285 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 RASSF7Q02833 373 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 C16orf71Q8IYS4 520 aaPredicted RBP7.32□□□□□ -1.24
CLIP4-202ENST00000401605 NBPF15Q8N660 670 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 JMYQ8N9B5 988 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 CNKSR1Q969H4 720 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 MIS18AQ9NYP9 233 aa7.32□□□□□ -1.24
CLIP4-202ENST00000401605 KIAA1551Q9HCM1 1747 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 PAX7P23759 505 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 CD151P48509 253 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 STYK1Q6J9G0 422 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 CCDC24Q8N4L8 307 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 PXYLP1Q8TE99 480 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 KIF12Q96FN5 646 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 TINF2Q9BSI4 451 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 TMX4Q9H1E5 349 aaPredicted RBP7.31□□□□□ -1.24
CLIP4-202ENST00000401605 CALCOCO1Q9P1Z2 691 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 PRKAG2Q9UGJ0 569 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 SYNPO2Q9UMS6 1093 aa7.31□□□□□ -1.24
CLIP4-202ENST00000401605 hCG_2014768A0A024R1R8 64 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 NFKBIEO00221 500 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 PIK3CDO00329 1044 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 OFD1O75665 1012 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 SRGNP10124 158 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 EIF4A1P60842 406 aaKnown RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 GOLGA2Q08379 1002 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 CDC37Q16543 378 aaPredicted RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 PTPROQ16827 1216 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 PUS10Q3MIT2 529 aaKnown RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 ZFYVE27Q5T4F4 411 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 SOGA3Q5TF21 947 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 TPTE2Q6XPS3 522 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 ACRBPQ8NEB7 543 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 MASTLQ96GX5 879 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 UBR2Q8IWV8 1755 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 C21orf2O43822 256 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 KIF4AO95239 1232 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 APLP1P51693 650 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 NEXNQ0ZGT2 675 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 TUSC1Q2TAM9 212 aa7.3□□□□□ -1.24
CLIP4-202ENST00000401605 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 RANBP17Q9H2T7 1088 aaKnown RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 NIP7Q9Y221 180 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLIP4-202ENST00000401605 C2orf72A6NCS6 295 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 GLTPD2A6NH11 291 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 ERVV-1B6SEH8 477 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 PPFIA4O75335 1185 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 CCT2P78371 535 aaKnown RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 CTDSPL2Q05D32 466 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 FSTL1Q12841 308 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 TCEAL1Q15170 157 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 SWT1Q5T5J6 900 aaKnown RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 ZNF771Q7L3S4 317 aaPredicted RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 ERCC4Q92889 916 aaPredicted RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 THUMPD2Q9BTF0 503 aaKnown RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 RRAGCQ9HB90 399 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 CUEDC1Q9NWM3 386 aaPredicted RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 PAXBP1Q9Y5B6 917 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 KLRG2A4D1S0 409 aaPredicted RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 NPR1P16066 1061 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 DDX10Q13206 875 aaKnown RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 DPY19L2Q6NUT2 758 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 PRPF40BQ6NWY9 871 aaKnown RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 TAOK3Q9H2K8 898 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 BABAM1Q9NWV8 329 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 TSPYL4Q9UJ04 414 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 PNMA2Q9UL42 364 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 MYBBP1AQ9BQG0 1328 aaKnown RBP7.29□□□□□ -1.24
CLIP4-202ENST00000401605 LTBP3Q9NS15 1303 aa7.29□□□□□ -1.24
CLIP4-202ENST00000401605 N4BP2Q86UW6 1770 aaPredicted RBP7.28□□□□□ -1.24
CLIP4-202ENST00000401605 VEGFAP15692 232 aaPredicted RBP7.28□□□□□ -1.24
CLIP4-202ENST00000401605 PRELPP51888 382 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 NAP1L1P55209 391 aaKnown RBP7.28□□□□□ -1.24
CLIP4-202ENST00000401605 IGBP1P78318 339 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 TRDNQ13061 729 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 BIRC2Q13490 618 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 HLFQ16534 295 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 KIF6Q6ZMV9 814 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 NT5DC4Q86YG4 428 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 KCNB2Q92953 911 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 ANO2Q9NQ90 1003 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 RRP7AQ9Y3A4 280 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms