RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
CACNA1C-215ENST00000399637 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
CACNA1C-215ENST00000399637 CTAGE6Q86UF2 777 aa12.45□□□□□ -0.42
CACNA1C-215ENST00000399637 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
CACNA1C-215ENST00000399637 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
CACNA1C-215ENST00000399637 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
CACNA1C-215ENST00000399637 ERCC5P28715 1186 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 RRP36Q96EU6 259 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 MAFGO15525 162 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 ASIC1P78348 528 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 RTL9Q8NET4 1388 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 UNC13AQ9UPW8 1703 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 CACYBPQ9HB71 228 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 CAVIN2O95810 425 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 ZBTB16Q05516 673 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 LCA5Q86VQ0 697 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
CACNA1C-215ENST00000399637 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 DAPK3O43293 454 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 CRCPO75575 148 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 ZFYP08048 801 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 ZNF165P49910 485 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 CFAP157Q5JU67 520 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 PSMA7O14818 248 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 GMNNO75496 209 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 TCP10Q12799 353 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 KCNG4Q8TDN1 519 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 PFDN4Q9NQP4 134 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 CCT6BQ92526 530 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 CCDC89Q8N998 374 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
CACNA1C-215ENST00000399637 SPAG1Q07617 926 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 PLCB3Q01970 1234 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 BICDL2A1A5D9 508 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 ALDH3A1P30838 453 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 NESP48681 1621 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 KRT2P35908 639 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 KRT83P78385 493 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 SNX21Q969T3 373 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
CACNA1C-215ENST00000399637 CHMP2AO43633 222 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 SORBS3O60504 671 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 CD2APQ9Y5K6 639 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 CTAGE9A4FU28 777 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 KLHL40Q2TBA0 621 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 CCDC114Q96M63 670 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 FNDC3AQ9Y2H6 1198 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 PPFIA3O75145 1194 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 GPCPD1Q9NPB8 672 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 ZSCAN22P10073 491 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 DNM2P50570 870 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
CACNA1C-215ENST00000399637 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 PPP1R7Q15435 360 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 PTGS1P23219 599 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 KIF5AQ12840 1032 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 TEX11Q8IYF3 940 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 JAKMIP2Q96AA8 810 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 KDM2BQ8NHM5 1336 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 ANXA1P04083 346 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 STRN3Q13033 797 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 KRT79Q5XKE5 535 aa12.4□□□□□ -0.42
CACNA1C-215ENST00000399637 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms