RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 MBD4O95243 580 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 CKAP4Q07065 602 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 DTHD1Q6ZMT9 781 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 IL16Q14005 1332 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 GOLGA6L9A6NEM1 432 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 EXOC7Q9UPT5 735 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 TRIM75PA6NK02 468 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 FNBP4Q8N3X1 1017 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 PAIP2Q9BPZ3 127 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 BICDL2A1A5D9 508 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 CRCPO75575 148 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 USH1GQ495M9 461 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 TTC22Q5TAA0 569 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 NSMFQ6X4W1 530 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 CCDC65Q8IXS2 484 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 CCT6BQ92526 530 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 RAPGEF6Q8TEU7 1601 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 CYLC1P35663 651 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 CWF19L2Q2TBE0 894 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 DCAF17Q5H9S7 520 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 C6orf163Q5TEZ5 329 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 NSMCE1Q8WV22 266 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 LMBR1Q8WVP7 490 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 FAM89AQ96GI7 184 aa13.62□□□□□ -0.23
CACNA1C-213ENST00000399629 KRT9P35527 623 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 CCT6AP40227 531 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 NMIQ13287 307 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 KIFAP3Q92845 792 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 AGTPBP1Q9UPW5 1226 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 PSMC4P43686 418 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 KCNG4Q8TDN1 519 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 CCDC114Q96M63 670 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 ITSN2Q9NZM3 1697 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 LINS1Q8NG48 757 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 PLIN2Q99541 437 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 GSDMDP57764 484 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 NECAB1Q8N987 351 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 KIF18AQ8NI77 898 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 ZWINTO95229 277 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 GSDMBQ8TAX9 411 aa13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
CACNA1C-213ENST00000399629 ARHGEF35A5YM69 484 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 RPL13P26373 211 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 LETM2Q2VYF4 491 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 CEP135Q66GS9 1140 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 NEK11Q8NG66 645 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 DDX17Q92841 729 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 MXRA7P84157 204 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 MEIS3Q99687 375 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 MLXIPQ9HAP2 919 aa13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 TRMT1Q9NXH9 659 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-213ENST00000399629 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 CEP112Q8N8E3 955 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 RIOK1Q9BRS2 568 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 E7EVH7 732 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 CCNT1O60563 726 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 ATP2A2P16615 1042 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 METTL13Q8N6R0 699 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 CGNQ9P2M7 1197 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 SLC1A4P43007 532 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 SV2BQ7L1I2 683 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 KRT19P08727 400 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 RNF187Q5TA31 235 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
CACNA1C-213ENST00000399629 ARHGEF16Q5VV41 709 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 CCDC125Q86Z20 511 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 CCDC77Q9BR77 488 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 MED10Q9BTT4 135 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 ARMT1Q9H993 441 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 USP40Q9NVE5 1235 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 ATP6V0A2Q9Y487 856 aa13.58□□□□□ -0.23
CACNA1C-213ENST00000399629 OSBPP22059 807 aa13.58□□□□□ -0.24
CACNA1C-213ENST00000399629 TBC1D9Q6ZT07 1266 aa13.58□□□□□ -0.24
CACNA1C-213ENST00000399629 HAUS3Q68CZ6 603 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms