RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
RGPD1-201ENST00000398193 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
RGPD1-201ENST00000398193 TAOK2Q9UL54 1235 aa8.71□□□□□ -1.02
RGPD1-201ENST00000398193 ATP2B4P23634 1241 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 RALYLQ86SE5 291 aaKnown RBP8.7□□□□□ -1.02
RGPD1-201ENST00000398193 TMTC2Q8N394 836 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 COL1A1P02452 1464 aaPredicted RBP8.7□□□□□ -1.02
RGPD1-201ENST00000398193 BBOX1O75936 387 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 LARGE1O95461 756 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 FGRP09769 529 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 STK36Q9NRP7 1315 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 MAGEB6Q8N7X4 407 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 SRP68Q9UHB9 627 aaKnown RBP8.7□□□□□ -1.02
RGPD1-201ENST00000398193 ZNF804AQ7Z570 1209 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 NDUFB9Q9Y6M9 179 aa8.7□□□□□ -1.02
RGPD1-201ENST00000398193 DDX49Q9Y6V7 483 aaKnown RBP8.7□□□□□ -1.02
RGPD1-201ENST00000398193 UBE2HP62256 183 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 NFIXQ14938 502 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 SGMS1Q86VZ5 419 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 AKT1S1Q96B36 256 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 WWC3Q9ULE0 1092 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 IDH1O75874 414 aaKnown RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 HIBADHP31937 336 aaKnown RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 LIFRP42702 1097 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 CCDC178Q5BJE1 867 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 LARP1BQ659C4 914 aaKnown RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 IFNL3Q8IZI9 196 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 WDR66Q8TBY9 1149 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 FAM84BQ96KN1 310 aaPredicted RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 DDX60LQ5H9U9 1706 aaKnown RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 GYS1P13807 737 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 MAGEB6P1A0A0J9YX57 407 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 SH2B2O14492 632 aaPredicted RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 PDIA3P30101 505 aaKnown RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 BCAMP50895 628 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 C3orf67Q6ZVT6 689 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 SCAND2PQ9GZW5 306 aaPredicted RBP8.69□□□□□ -1.02
RGPD1-201ENST00000398193 SUGT1Q9Y2Z0 365 aa8.69□□□□□ -1.02
RGPD1-201ENST00000398193 PRC1O43663 620 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 SCRN1Q12765 414 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 PKP1Q13835 747 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 SBK1Q52WX2 424 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 VPS37DQ86XT2 251 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 NSUN7Q8NE18 718 aaKnown RBP8.68□□□□□ -1.02
RGPD1-201ENST00000398193 RPGRQ92834 1020 aaKnown RBP8.68□□□□□ -1.02
RGPD1-201ENST00000398193 C10orf71Q711Q0 1435 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 FGD1P98174 961 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 PRR5LQ6MZQ0 368 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 CELF1Q92879 486 aaKnown RBP8.68□□□□□ -1.02
RGPD1-201ENST00000398193 LRRC4BQ9NT99 713 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 WASF1Q92558 559 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 NAPBQ9H115 298 aa8.68□□□□□ -1.02
RGPD1-201ENST00000398193 MBD4O95243 580 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 CPA1P15085 419 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 KRT85P78386 507 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 SART3Q15020 963 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 NOL8Q76FK4 1167 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 ZNF396Q96N95 335 aaPredicted RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 SLC3A2P08195 630 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 IL1R1P14778 569 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 PTF1AQ7RTS3 328 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 BRF1Q92994 677 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 ANGEL1Q9UNK9 670 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 ANKRD31Q8N7Z5 1873 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 GSG1L2A8MUP6 293 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 POLRMTO00411 1230 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 AKNAD1Q5T1N1 836 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 NAV1Q8NEY1 1877 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 CFAP45Q9UL16 551 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 ECM29Q5VYK3 1845 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 SERPINB2P05120 415 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 FAM184AQ8NB25 1140 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 TDRD7Q8NHU6 1098 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 ARPP21Q9UBL0 812 aaPredicted RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 TAF6LQ9Y6J9 622 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 MORC2Q9Y6X9 1032 aaPredicted RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 MYO5AQ9Y4I1 1855 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 CYP7A1P22680 504 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 HELBQ8NG08 1087 aaPredicted RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 CRNKL1Q9BZJ0 848 aaKnown RBP8.67□□□□□ -1.02
RGPD1-201ENST00000398193 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
RGPD1-201ENST00000398193 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 LDHCP07864 332 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 ANTXR2P58335 489 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 RESTQ13127 1097 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 TXNRD1Q16881 649 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 ZSCAN23Q3MJ62 389 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 CCDC183Q5T5S1 534 aa8.66□□□□□ -1.02
RGPD1-201ENST00000398193 CPLX2Q6PUV4 134 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms