RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 AIFM3Q96NN9 605 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ARGLU1Q9NWB6 273 aaPredicted RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 CEP126Q9P2H0 1117 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 CLIP2Q9UDT6 1046 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 KCNG1Q9UIX4 513 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ASAP1Q9ULH1 1129 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 NCAPD2Q15021 1401 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 BECN2A8MW95 431 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 GOLGA6L19H0YKK7 550 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 UBE2Q2LH0YL09 131 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 NPHP1O15259 732 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 IDH1O75874 414 aaKnown RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 GYS2P54840 703 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 CASP7P55210 303 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 SF3A1Q15459 793 aaKnown RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 CCDC144BQ3MJ40 725 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 RABL6Q3YEC7 729 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 TTC31Q49AM3 519 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 XAGE2Q96GT9 111 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 AK7Q96M32 723 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 SDF4Q9BRK5 362 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 MYL10Q9BUA6 226 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 TOMM22Q9NS69 142 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 TRMT1Q9NXH9 659 aaKnown RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 FHOD1Q9Y613 1164 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 KIF2AO00139 706 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 EYA2O00167 538 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 POLR3GO15318 223 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 FGAP02671 866 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 PNMA6AP0CW24 399 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 H2AFXP16104 143 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 MARCKSP29966 332 aaPredicted RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 PDIA3P30101 505 aaKnown RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 USPL1Q5W0Q7 1092 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 SRLQ86TD4 932 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 GOLGA5Q8TBA6 731 aa5.81□□□□□ -1.48
SSR1-202ENST00000397511 RRP15Q9Y3B9 282 aaKnown RBP5.81□□□□□ -1.48
SSR1-202ENST00000397511 N4BP2Q86UW6 1770 aaPredicted RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 KLF18A0A0U1RQI7 1052 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 H7C1W4 665 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CPLX1O14810 134 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 RNF113AO15541 343 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 NEMFO60524 1076 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 HLFQ16534 295 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CCDC158Q5M9N0 1113 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 TMCO3Q6UWJ1 677 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 DNAJC10Q8IXB1 793 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 FSIP1Q8NA03 581 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 DRC1Q96MC2 740 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CLSTN2Q9H4D0 955 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CFAP45Q9UL16 551 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 TBC1D2BQ9UPU7 963 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CLIC4Q9Y696 253 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 AFDNP55196 1824 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 GOLGA8BA8MQT2 603 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 PATL2C9JE40 543 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 KINO60870 393 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 PRR29P0C7W0 189 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 IL15P40933 162 aaPredicted RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 PLA2G4AP47712 749 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CT47A1Q5JQC4 288 aaPredicted RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 LDHAL6AQ6ZMR3 332 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CCDC73Q6ZRK6 1079 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CCDC91Q7Z6B0 441 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CMTR1Q8N1G2 835 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 CACTINQ8WUQ7 758 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 PHKBQ93100 1093 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 IQSEC3Q9UPP2 1182 aaPredicted RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 USP54Q70EL1 1684 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 USP27XA6NNY8 438 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 FDPSP14324 419 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 ADD1P35611 737 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 CLCN6P51797 869 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 METTL24Q5JXM2 366 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 ILDR1Q86SU0 546 aaPredicted RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 MICU3Q86XE3 530 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 AOPEPQ8N6M6 819 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 FBXO18Q8NFZ0 1043 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 SENP2Q9HC62 589 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 ATG3Q9NT62 314 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 DDX19AQ9NUU7 478 aaKnown RBP5.8□□□□□ -1.48
SSR1-202ENST00000397511 LCMT1Q9UIC8 334 aa5.8□□□□□ -1.48
SSR1-202ENST00000397511 ELP1O95163 1332 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 PRC1O43663 620 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 PFKFB2O60825 505 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 ATP2B1P20020 1258 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 ZNF75DP51815 510 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 NDUFA8P51970 172 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 IFIT5Q13325 482 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 GNL2Q13823 731 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 STK38Q15208 465 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 RRP12Q5JTH9 1297 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 SPECC1Q5M775 1068 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 ZMYM1Q5SVZ6 1142 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 SLC9C2Q5TAH2 1124 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 RALYLQ86SE5 291 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 CEP120Q8N960 986 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 MNS1Q8NEH6 495 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 SMARCE1Q969G3 411 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms