RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
CAPN3-206ENST00000397163 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-206ENST00000397163 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 CASQ1P31415 396 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 PIP4K2AP48426 406 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-206ENST00000397163 ANKRD13DQ6ZTN6 518 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 RAB11FIP4Q86YS3 637 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 SRRTQ9BXP5 876 aaKnown RBP10.58□□□□□ -0.72
CAPN3-206ENST00000397163 PXDNQ92626 1479 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 CPLX1O14810 134 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
CAPN3-206ENST00000397163 PSME1Q06323 249 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 E2F4Q16254 413 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 POLR3EQ9NVU0 708 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 CBFA2T2O43439 604 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 ZRANB2O95218 330 aaKnown RBP eCLIP10.57□□□□□ -0.72
CAPN3-206ENST00000397163 PFKFB1P16118 471 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 MARCKSP29966 332 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-206ENST00000397163 GOLGA8FQ08AF8 430 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 GOLGA8DPQ0D2H9 430 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 GNL2Q13823 731 aaKnown RBP10.57□□□□□ -0.72
CAPN3-206ENST00000397163 PTPN21Q16825 1174 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 GJB4Q9NTQ9 266 aa10.57□□□□□ -0.72
CAPN3-206ENST00000397163 RRP15Q9Y3B9 282 aaKnown RBP10.57□□□□□ -0.72
CAPN3-206ENST00000397163 A0A087WZG4 1122 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 TADA3O75528 432 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
CAPN3-206ENST00000397163 EVCP57679 992 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 ZMYM1Q5SVZ6 1142 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 ANO1Q5XXA6 986 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 FOXR1Q6PIV2 292 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 DPF2Q92785 391 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 GOLGA8BA8MQT2 603 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 IKBKBO14920 756 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 APPP05067 770 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 TPM1P09493 284 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 HAND2P61296 217 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
CAPN3-206ENST00000397163 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 TRIM65Q6PJ69 517 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 BRAPQ7Z569 592 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 FBXO18Q8NFZ0 1043 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 TMEM94Q12767 1356 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 NEDD4P46934 1319 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 MRC1P22897 1456 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 KLF18A0A0U1RQI7 1052 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 EFCAB8A8MWE9 144 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 ZSCAN12O43309 604 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 CMA1P23946 247 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 SYKP43405 635 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 TIMM10P62072 90 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 MYL5Q02045 173 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 ICE2Q659A1 982 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 LMBR1LQ6UX01 489 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
CAPN3-206ENST00000397163 MAST3O60307 1309 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 STRCP1A6NGW2 1772 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-206ENST00000397163 SRLQ86TD4 932 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 RBM33Q96EV2 1170 aaKnown RBP10.55□□□□□ -0.72
CAPN3-206ENST00000397163 GNG11P61952 73 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 SMC1AQ14683 1233 aaKnown RBP10.55□□□□□ -0.72
CAPN3-206ENST00000397163 CCDC158Q5M9N0 1113 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 PDILTQ8N807 584 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 C19orf44Q9H6X5 657 aa10.55□□□□□ -0.72
CAPN3-206ENST00000397163 KIF28PB7ZC32 967 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 RNF113AO15541 343 aaKnown RBP10.54□□□□□ -0.72
CAPN3-206ENST00000397163 IFIT1P09914 478 aaKnown RBP10.54□□□□□ -0.72
CAPN3-206ENST00000397163 RABL6Q3YEC7 729 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-206ENST00000397163 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-206ENST00000397163 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 PACS2Q86VP3 889 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 REXO1L1PQ8IX06 675 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 TMEM232C9JQI7 657 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 WDHD1O75717 1129 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-206ENST00000397163 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 PALLDQ8WX93 1383 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 FANCGO15287 622 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 PRC1O43663 620 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 ATF3P18847 181 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 GPS2Q13227 327 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 MUM1L1Q5H9M0 696 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 HSD3B7Q9H2F3 369 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 PPP2R2CQ9Y2T4 447 aa10.54□□□□□ -0.72
CAPN3-206ENST00000397163 MROH7-TTC4A0A0A0MT08 1334 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 M0R2C6 588 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 ARHGAP6O43182 974 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 KIF23Q02241 960 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-206ENST00000397163 PNOCQ13519 176 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms