RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.36
SEC13-204ENST00000397099 UNCXA6NJT0 531 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 UBE2Q2LH0YL09 131 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
SEC13-204ENST00000397099 SUPT20HL1Q3ZLR7 823 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 RASAL3Q86YV0 1011 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 ITPRIPQ8IWB1 547 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
SEC13-204ENST00000397099 TEKT1Q969V4 418 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 DEFB129Q9H1M3 183 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 DENND2AQ9ULE3 1009 aa17.26■□□□□ 0.35
SEC13-204ENST00000397099 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
SEC13-204ENST00000397099 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
SEC13-204ENST00000397099 CRKP46108 304 aa17.25■□□□□ 0.35
SEC13-204ENST00000397099 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEC13-204ENST00000397099 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
SEC13-204ENST00000397099 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
SEC13-204ENST00000397099 ABHD8Q96I13 439 aa17.25■□□□□ 0.35
SEC13-204ENST00000397099 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
SEC13-204ENST00000397099 SALL1Q9NSC2 1324 aa17.24■□□□□ 0.35
SEC13-204ENST00000397099 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
SEC13-204ENST00000397099 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
SEC13-204ENST00000397099 TNNI2P48788 182 aa17.24■□□□□ 0.35
SEC13-204ENST00000397099 PRKG1Q13976 671 aa17.24■□□□□ 0.35
SEC13-204ENST00000397099 IQSEC3Q9UPP2 1182 aaPredicted RBP17.24■□□□□ 0.35
SEC13-204ENST00000397099 TRPA1O75762 1119 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 HHIPL2Q6UWX4 724 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 SSH3Q8TE77 659 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 ZDHHC15Q96MV8 337 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 TNNQ9UQP3 1299 aa17.23■□□□□ 0.35
SEC13-204ENST00000397099 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 FKBP1CQ5VVH2 108 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
SEC13-204ENST00000397099 CSRNP1Q96S65 589 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 RNF186Q9NXI6 227 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 TMOD2Q9NZR1 351 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
SEC13-204ENST00000397099 A0A1B0GUL7 405 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 TFCP2Q12800 502 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 POLA2Q14181 598 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 SLF2Q8IX21 1173 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 HOOK2Q96ED9 719 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
SEC13-204ENST00000397099 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
SEC13-204ENST00000397099 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
SEC13-204ENST00000397099 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
SEC13-204ENST00000397099 CCDC85CA6NKD9 419 aa17.2■□□□□ 0.34
SEC13-204ENST00000397099 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
SEC13-204ENST00000397099 RLBP1P12271 317 aa17.2■□□□□ 0.34
SEC13-204ENST00000397099 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
SEC13-204ENST00000397099 DGKZQ13574 1117 aa17.2■□□□□ 0.34
SEC13-204ENST00000397099 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
SEC13-204ENST00000397099 SPTY2D1Q68D10 685 aaPredicted RBP17.2■□□□□ 0.34
SEC13-204ENST00000397099 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
SEC13-204ENST00000397099 ANGEL1Q9UNK9 670 aaKnown RBP17.2■□□□□ 0.34
SEC13-204ENST00000397099 IGSF3O75054 1194 aa17.19■□□□□ 0.34
SEC13-204ENST00000397099 PHKA1P46020 1223 aa17.19■□□□□ 0.34
SEC13-204ENST00000397099 IREB2P48200 963 aaKnown RBP17.19■□□□□ 0.34
SEC13-204ENST00000397099 TIMM10P62072 90 aa17.19■□□□□ 0.34
SEC13-204ENST00000397099 OS9Q13438 667 aaPredicted RBP17.19■□□□□ 0.34
SEC13-204ENST00000397099 RASA3Q14644 834 aa17.19■□□□□ 0.34
SEC13-204ENST00000397099 FAM83AQ86UY5 434 aa17.19■□□□□ 0.34
SEC13-204ENST00000397099 XAGE2Q96GT9 111 aa17.19■□□□□ 0.34
SEC13-204ENST00000397099 TDRD3Q9H7E2 651 aaKnown RBP17.19■□□□□ 0.34
SEC13-204ENST00000397099 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
SEC13-204ENST00000397099 LDLRAD1Q5T700 205 aa17.18■□□□□ 0.34
SEC13-204ENST00000397099 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
SEC13-204ENST00000397099 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
SEC13-204ENST00000397099 UQCRFS1P1P0C7P4 283 aa17.17■□□□□ 0.34
SEC13-204ENST00000397099 PDE3AQ14432 1141 aa17.17■□□□□ 0.34
SEC13-204ENST00000397099 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
SEC13-204ENST00000397099 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
SEC13-204ENST00000397099 FZD1Q9UP38 647 aa17.17■□□□□ 0.34
SEC13-204ENST00000397099 CASP8AP2Q9UKL3 1982 aa17.17■□□□□ 0.34
SEC13-204ENST00000397099 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
SEC13-204ENST00000397099 ADORA1P30542 326 aa17.16■□□□□ 0.34
SEC13-204ENST00000397099 INHBEP58166 350 aa17.16■□□□□ 0.34
SEC13-204ENST00000397099 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
SEC13-204ENST00000397099 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
SEC13-204ENST00000397099 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
SEC13-204ENST00000397099 PANK1Q8TE04 598 aa17.16■□□□□ 0.34
SEC13-204ENST00000397099 RPAP1Q9BWH6 1393 aaPredicted RBP17.15■□□□□ 0.34
SEC13-204ENST00000397099 HMMRO75330 724 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 GRIK5Q16478 980 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 ANKRD13AQ8IZ07 590 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 SLC10A4Q96EP9 437 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 FAM163AQ96GL9 167 aaPredicted RBP17.15■□□□□ 0.34
SEC13-204ENST00000397099 MYH2Q9UKX2 1941 aa17.15■□□□□ 0.34
SEC13-204ENST00000397099 AOX1Q06278 1338 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms