RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 ZMYM6O95789 1325 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 CDKL5O76039 1030 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 ATL3Q6DD88 541 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 SYNE3Q6ZMZ3 975 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 IFNL3Q8IZI9 196 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 ZNF396Q96N95 335 aaPredicted RBP18.93■□□□□ 0.62
SNX6-202ENST00000396526 KRT23Q9C075 422 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 ANGEL1Q9UNK9 670 aaKnown RBP18.93■□□□□ 0.62
SNX6-202ENST00000396526 SEMA3EO15041 775 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 FOXP2O15409 715 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 CYP7A1P22680 504 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 SART3Q15020 963 aaKnown RBP18.93■□□□□ 0.62
SNX6-202ENST00000396526 FAM43AQ8N2R8 423 aa18.93■□□□□ 0.62
SNX6-202ENST00000396526 ARHGEF1Q92888 912 aaKnown RBP18.93■□□□□ 0.62
SNX6-202ENST00000396526 RNF41Q9H4P4 317 aaPredicted RBP18.93■□□□□ 0.62
SNX6-202ENST00000396526 FAM182BQ5T319 152 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 NFXL1Q6ZNB6 911 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 BCL2L12Q9HB09 334 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 ARMT1Q9H993 441 aa18.92■□□□□ 0.62
SNX6-202ENST00000396526 MFSD6Q6ZSS7 791 aa18.91■□□□□ 0.62
SNX6-202ENST00000396526 NCOA5Q9HCD5 579 aaKnown RBP18.91■□□□□ 0.62
SNX6-202ENST00000396526 TOMM22Q9NS69 142 aa18.91■□□□□ 0.62
SNX6-202ENST00000396526 PNPLA7Q6ZV29 1317 aa18.91■□□□□ 0.62
SNX6-202ENST00000396526 ADRA2BP18089 450 aa18.91■□□□□ 0.62
SNX6-202ENST00000396526 RBSNQ9H1K0 784 aa18.91■□□□□ 0.62
SNX6-202ENST00000396526 TFIP11Q9UBB9 837 aaKnown RBP18.91■□□□□ 0.62
SNX6-202ENST00000396526 ERICH2A1L162 156 aa18.9■□□□□ 0.62
SNX6-202ENST00000396526 GYG1P46976 350 aa18.9■□□□□ 0.62
SNX6-202ENST00000396526 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
SNX6-202ENST00000396526 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
SNX6-202ENST00000396526 CELF1Q92879 486 aaKnown RBP18.9■□□□□ 0.62
SNX6-202ENST00000396526 IQSEC3Q9UPP2 1182 aaPredicted RBP18.9■□□□□ 0.62
SNX6-202ENST00000396526 ZNF804BA4D1E1 1349 aa18.9■□□□□ 0.62
SNX6-202ENST00000396526 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
SNX6-202ENST00000396526 TTC6Q86TZ1 520 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
SNX6-202ENST00000396526 MYH7P12883 1935 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 MAGEB6P1A0A0J9YX57 407 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 ONECUT3O60422 494 aaPredicted RBP18.89■□□□□ 0.61
SNX6-202ENST00000396526 RESTQ13127 1097 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 FAM173BQ6P4H8 233 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 C8orf76Q96K31 380 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 B4E1Z4 1266 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 AKNAD1Q5T1N1 836 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 BICD2Q8TD16 824 aa18.89■□□□□ 0.61
SNX6-202ENST00000396526 LEO1Q8WVC0 666 aaPredicted RBP18.89■□□□□ 0.61
SNX6-202ENST00000396526 HIBADHP31937 336 aaKnown RBP18.88■□□□□ 0.61
SNX6-202ENST00000396526 METAP2P50579 478 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNX6-202ENST00000396526 TMEM67Q5HYA8 995 aa18.88■□□□□ 0.61
SNX6-202ENST00000396526 C3orf67Q6ZVT6 689 aa18.88■□□□□ 0.61
SNX6-202ENST00000396526 TCHHQ07283 1943 aa18.88■□□□□ 0.61
SNX6-202ENST00000396526 CTDNEP1O95476 244 aa18.88■□□□□ 0.61
SNX6-202ENST00000396526 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
SNX6-202ENST00000396526 TMTC2Q8N394 836 aa18.88■□□□□ 0.61
SNX6-202ENST00000396526 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
SNX6-202ENST00000396526 CCDC69A6NI79 296 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 IFIT3O14879 490 aaKnown RBP18.87■□□□□ 0.61
SNX6-202ENST00000396526 FOSBP53539 338 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 TBC1D10CQ8IV04 446 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 HSPA1LP34931 641 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 CNBD1Q8NA66 436 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 MIGA1Q8NAN2 632 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 FAM84BQ96KN1 310 aaPredicted RBP18.87■□□□□ 0.61
SNX6-202ENST00000396526 PPP1R9BQ96SB3 815 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 DDX19AQ9NUU7 478 aaKnown RBP18.87■□□□□ 0.61
SNX6-202ENST00000396526 GSG1L2A8MUP6 293 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 ZBTB43O43298 467 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 ANTXR2P58335 489 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 SMIM5Q71RC9 77 aa18.87■□□□□ 0.61
SNX6-202ENST00000396526 UVSSAQ2YD98 709 aa18.86■□□□□ 0.61
SNX6-202ENST00000396526 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
SNX6-202ENST00000396526 NUP62CLQ9H1M0 184 aa18.86■□□□□ 0.61
SNX6-202ENST00000396526 QTRT2Q9H974 415 aaKnown RBP18.86■□□□□ 0.61
SNX6-202ENST00000396526 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
SNX6-202ENST00000396526 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
SNX6-202ENST00000396526 RRP12Q5JTH9 1297 aaKnown RBP18.86■□□□□ 0.61
SNX6-202ENST00000396526 MTA3Q9BTC8 594 aa18.86■□□□□ 0.61
SNX6-202ENST00000396526 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
SNX6-202ENST00000396526 SLC12A7Q9Y666 1083 aa18.86■□□□□ 0.61
SNX6-202ENST00000396526 SH2B2O14492 632 aaPredicted RBP18.85■□□□□ 0.61
SNX6-202ENST00000396526 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
SNX6-202ENST00000396526 LCORLQ8N3X6 602 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 RGS22Q8NE09 1264 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 BCORQ6W2J9 1755 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 LAMB2P55268 1798 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 LIFRP42702 1097 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 FBXO33Q7Z6M2 555 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 KDM4AO75164 1064 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 CCDC192P0DO97 292 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 TRIM29Q14134 588 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 SALL1Q9NSC2 1324 aa18.85■□□□□ 0.61
SNX6-202ENST00000396526 IGSF3O75054 1194 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 ARAP2Q8WZ64 1704 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 MAP3K11Q16584 847 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 SLC27A3Q5K4L6 730 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms