RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
ITGB1-202ENST00000396033 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
ITGB1-202ENST00000396033 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
ITGB1-202ENST00000396033 ARMT1Q9H993 441 aa14.31□□□□□ -0.12
ITGB1-202ENST00000396033 TRDNQ13061 729 aa14.31□□□□□ -0.12
ITGB1-202ENST00000396033 CSPP1Q1MSJ5 1256 aa14.31□□□□□ -0.12
ITGB1-202ENST00000396033 TBC1D10CQ8IV04 446 aa14.31□□□□□ -0.12
ITGB1-202ENST00000396033 ZNF274Q96GC6 653 aaPredicted RBP14.31□□□□□ -0.12
ITGB1-202ENST00000396033 NBPF3Q9H094 633 aa14.31□□□□□ -0.12
ITGB1-202ENST00000396033 PDIA3P30101 505 aaKnown RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 FBXL16Q8N461 479 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 NSUN7Q8NE18 718 aaKnown RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 ABCF2Q9UG63 623 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 ADRA2BP18089 450 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 NFIXQ14938 502 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 NAPBQ9H115 298 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 NCOA5Q9HCD5 579 aaKnown RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 PTPDC1A2A3K4 754 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 PATL2C9JE40 543 aaKnown RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 ANTXR2P58335 489 aa14.3□□□□□ -0.12
ITGB1-202ENST00000396033 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
ITGB1-202ENST00000396033 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 KRT27Q7Z3Y8 459 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 CNBD1Q8NA66 436 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 SYAP1Q96A49 352 aaPredicted RBP14.29□□□□□ -0.12
ITGB1-202ENST00000396033 ANKRD2Q9GZV1 360 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 H3BQV1 296 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 HMGN5P82970 282 aaKnown RBP14.29□□□□□ -0.12
ITGB1-202ENST00000396033 ALX1Q15699 326 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 IFNL3Q8IZI9 196 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 FAM84BQ96KN1 310 aaPredicted RBP14.29□□□□□ -0.12
ITGB1-202ENST00000396033 WDR19Q8NEZ3 1342 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 DENND2AQ9ULE3 1009 aa14.29□□□□□ -0.12
ITGB1-202ENST00000396033 CTDNEP1O95476 244 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 GNAT2P19087 354 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 KIF3AQ9Y496 699 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 PNPLA7Q6ZV29 1317 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 TRIM37O94972 964 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 CYP7A1P22680 504 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 KLRK1P26718 216 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 UBE2HP62256 183 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 KRT85P78386 507 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 EP400Q96L91 3159 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 SYCE3A1L190 88 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 EVCP57679 992 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 SLC27A3Q5K4L6 730 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
ITGB1-202ENST00000396033 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.12
ITGB1-202ENST00000396033 BRWD3Q6RI45 1802 aa14.27□□□□□ -0.12
ITGB1-202ENST00000396033 PRKAB2O43741 272 aa14.27□□□□□ -0.12
ITGB1-202ENST00000396033 TM4SF1P30408 202 aa14.27□□□□□ -0.12
ITGB1-202ENST00000396033 TDO2P48775 406 aa14.27□□□□□ -0.12
ITGB1-202ENST00000396033 GSG1L2A8MUP6 293 aa14.27□□□□□ -0.13
ITGB1-202ENST00000396033 FOSBP53539 338 aa14.27□□□□□ -0.13
ITGB1-202ENST00000396033 FAM173BQ6P4H8 233 aa14.27□□□□□ -0.13
ITGB1-202ENST00000396033 NEDD4P46934 1319 aa14.27□□□□□ -0.13
ITGB1-202ENST00000396033 FBXO33Q7Z6M2 555 aa14.27□□□□□ -0.13
ITGB1-202ENST00000396033 NAP1L5Q96NT1 182 aaPredicted RBP14.27□□□□□ -0.13
ITGB1-202ENST00000396033 B4E1Z4 1266 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 TFCP2L1Q9NZI6 479 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 SALL1Q9NSC2 1324 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 PPFIA3O75145 1194 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 CYB5R4Q7L1T6 521 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 ADGRA1Q86SQ6 560 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 SEMA3EO15041 775 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
ITGB1-202ENST00000396033 HIBADHP31937 336 aaKnown RBP14.25□□□□□ -0.13
ITGB1-202ENST00000396033 GRAPQ13588 217 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 LRSAM1Q6UWE0 723 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 RAB11FIP4Q86YS3 637 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
ITGB1-202ENST00000396033 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
ITGB1-202ENST00000396033 MAGEB6P1A0A0J9YX57 407 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 GYS1P13807 737 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 RESTQ13127 1097 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 PRR5LQ6MZQ0 368 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 TIAM2Q8IVF5 1701 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 DHX16O60231 1041 aaKnown RBP14.25□□□□□ -0.13
ITGB1-202ENST00000396033 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
ITGB1-202ENST00000396033 SH2B2O14492 632 aaPredicted RBP14.24□□□□□ -0.13
ITGB1-202ENST00000396033 HSP90AA2PQ14568 343 aaPredicted RBP14.24□□□□□ -0.13
ITGB1-202ENST00000396033 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
ITGB1-202ENST00000396033 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 NASPP49321 788 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms