RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SUCLG2Q96I99 432 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 ZNHIT6Q9NWK9 470 aaKnown RBP3.9□□□□□ -1.78
VPS13C-203ENST00000395896 GGA1Q9UJY5 639 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 MAGEB6P1A0A0J9YX57 407 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 H0YIN7 160 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 RANBP6O60518 1105 aaKnown RBP3.9□□□□□ -1.78
VPS13C-203ENST00000395896 RBM6P78332 1123 aaKnown RBP3.9□□□□□ -1.78
VPS13C-203ENST00000395896 RTN1Q16799 776 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 CCDC102BQ68D86 513 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 USP37Q86T82 979 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 SPATA5Q8NB90 893 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 DBNLQ9UJU6 430 aaKnown RBP3.9□□□□□ -1.78
VPS13C-203ENST00000395896 SPEF2Q9C093 1822 aa3.9□□□□□ -1.78
VPS13C-203ENST00000395896 CCDC83Q8IWF9 413 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC85AQ96PX6 553 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-203ENST00000395896 UBA7P41226 1012 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 AK2P54819 239 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 PTPN12Q05209 780 aaKnown RBP3.9□□□□□ -1.79
VPS13C-203ENST00000395896 STXBP4Q6ZWJ1 553 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 CTAGE1Q96RT6 745 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 RMND1Q9NWS8 449 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 CRKLP46109 303 aaKnown RBP3.9□□□□□ -1.79
VPS13C-203ENST00000395896 DBNDD2Q9BQY9 259 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 ZMYM6O95789 1325 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 SPATA31A1Q5TZJ5 1347 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 RPS6KA4O75676 772 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 MICU3Q86XE3 530 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 ISCA1Q9BUE6 129 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 ZSWIM6Q9HCJ5 1215 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 FOXD4L1Q9NU39 408 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 USP25Q9UHP3 1055 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC17Q96LX7 622 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 ORC3Q9UBD5 711 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-203ENST00000395896 KNL1Q8NG31 2342 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 COL14A1Q05707 1796 aaKnown RBP3.9□□□□□ -1.79
VPS13C-203ENST00000395896 CYP7A1P22680 504 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 MCM9Q9NXL9 1143 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 TNS2Q63HR2 1409 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 hCG_1984214I3L0E3 225 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 ATP2B4P23634 1241 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 EPS15P42566 896 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 BICDL1Q6ZP65 573 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF713Q8N859 430 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-203ENST00000395896 GTF3C6Q969F1 213 aa3.9□□□□□ -1.79
VPS13C-203ENST00000395896 GJB2P29033 226 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 AKNAD1Q5T1N1 836 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CLEC17AQ6ZS10 378 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 NUP133Q8WUM0 1156 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ADCY9O60503 1353 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 IGKV5-2P06315 115 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 GSPT1P15170 499 aaKnown RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CT47A1Q5JQC4 288 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 GPATCH4Q5T3I0 446 aaKnown RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 FAM200AQ8TCP9 573 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 PKNOX2Q96KN3 472 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 GJD4Q96KN9 370 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 TTC14Q96N46 770 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 PODXL2Q9NZ53 605 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ASAP1Q9ULH1 1129 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 PRC1O43663 620 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 SYT1P21579 422 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 NMIQ13287 307 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 TTLL11Q8NHH1 800 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ALDH8A1Q9H2A2 487 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MYO3BQ8WXR4 1341 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 F13A1P00488 732 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MYL1P05976 194 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 TRAPPC10P48553 1259 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 PODNQ7Z5L7 613 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 IQSEC3Q9UPP2 1182 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MYH2Q9UKX2 1941 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 RBM5P52756 815 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CETN1Q12798 172 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 RBM26Q5T8P6 1007 aaKnown RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 SIRT2Q8IXJ6 389 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 SLC4A4Q9Y6R1 1079 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 KLF18A0A0U1RQI7 1052 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ZBTB1Q9Y2K1 713 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MYH10P35580 1976 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF165P49910 485 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ZSCAN30Q86W11 494 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC112Q8NEF3 446 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 IQCDQ96DY2 449 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 STK32BQ9NY57 414 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF804BA4D1E1 1349 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 SFPQP23246 707 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CUL4AQ13619 759 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ZMYM1Q5SVZ6 1142 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 RNF26Q9BY78 433 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CNTNAP4Q9C0A0 1308 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 RGPD5Q99666 1765 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 HSPD1P10809 573 aaKnown RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 FERMT2Q96AC1 680 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MAGEC2Q9UBF1 373 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-203ENST00000395896 GOLGA8AA7E2F4 631 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 ERMNQ8TAM6 284 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 CUL5Q93034 780 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 MED23Q9ULK4 1368 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 BCL9O00512 1426 aa3.89□□□□□ -1.79
VPS13C-203ENST00000395896 RGPD1P0DJD0 1748 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms