RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CHAF1AQ13111 956 aaPredicted RBP18.08■□□□□ 0.49
SCAF11-204ENST00000395454 FBXW7Q969H0 707 aa18.08■□□□□ 0.49
SCAF11-204ENST00000395454 DNAJC2Q99543 621 aaKnown RBP18.08■□□□□ 0.49
SCAF11-204ENST00000395454 RPAP1Q9BWH6 1393 aaPredicted RBP18.08■□□□□ 0.49
SCAF11-204ENST00000395454 CLEC17AQ6ZS10 378 aa18.08■□□□□ 0.48
SCAF11-204ENST00000395454 SPATA5Q8NB90 893 aa18.08■□□□□ 0.48
SCAF11-204ENST00000395454 RNF181Q9P0P0 153 aa18.08■□□□□ 0.48
SCAF11-204ENST00000395454 DENND2AQ9ULE3 1009 aa18.08■□□□□ 0.48
SCAF11-204ENST00000395454 YDJCA8MPS7 323 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 SEMA3EO15041 775 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 INTS4Q96HW7 963 aaKnown RBP18.07■□□□□ 0.48
SCAF11-204ENST00000395454 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 KCNQ5Q9NR82 932 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 HMG20BQ9P0W2 317 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 ZNRF3Q9ULT6 936 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 RBM8AQ9Y5S9 174 aaKnown RBP18.07■□□□□ 0.48
SCAF11-204ENST00000395454 SCN9AQ15858 1988 aa18.07■□□□□ 0.48
SCAF11-204ENST00000395454 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
SCAF11-204ENST00000395454 GTF2IP78347 998 aa18.06■□□□□ 0.48
SCAF11-204ENST00000395454 TTLL5Q6EMB2 1281 aa18.06■□□□□ 0.48
SCAF11-204ENST00000395454 ZNF589Q86UQ0 364 aaPredicted RBP18.06■□□□□ 0.48
SCAF11-204ENST00000395454 DICER1Q9UPY3 1922 aaKnown RBP18.06■□□□□ 0.48
SCAF11-204ENST00000395454 CYP2E1P05181 493 aaPredicted RBP18.06■□□□□ 0.48
SCAF11-204ENST00000395454 ZAP70P43403 619 aa18.06■□□□□ 0.48
SCAF11-204ENST00000395454 C9orf131Q5VYM1 1079 aa18.06■□□□□ 0.48
SCAF11-204ENST00000395454 RAD17O75943 681 aa18.05■□□□□ 0.48
SCAF11-204ENST00000395454 UPF3BQ9BZI7 483 aaKnown RBP18.05■□□□□ 0.48
SCAF11-204ENST00000395454 ZSWIM6Q9HCJ5 1215 aa18.05■□□□□ 0.48
SCAF11-204ENST00000395454 HELLSQ9NRZ9 838 aa18.05■□□□□ 0.48
SCAF11-204ENST00000395454 MCM4P33991 863 aa18.04■□□□□ 0.48
SCAF11-204ENST00000395454 MCMDC2Q4G0Z9 681 aa18.04■□□□□ 0.48
SCAF11-204ENST00000395454 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
SCAF11-204ENST00000395454 CREB3L3Q68CJ9 461 aa18.04■□□□□ 0.48
SCAF11-204ENST00000395454 GOLIM4O00461 696 aa18.04■□□□□ 0.48
SCAF11-204ENST00000395454 USP17L3A6NCW0 530 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 USP17L4A6NCW7 530 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 FZD9O00144 591 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 SLC27A2O14975 620 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
SCAF11-204ENST00000395454 USP17L1Q7RTZ2 530 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 TNPO1Q92973 898 aaKnown RBP18.03■□□□□ 0.48
SCAF11-204ENST00000395454 ABCF2Q9UG63 623 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 DOCK2Q92608 1830 aa18.03■□□□□ 0.48
SCAF11-204ENST00000395454 EIF6P56537 245 aaKnown RBP18.02■□□□□ 0.48
SCAF11-204ENST00000395454 NUCB2P80303 420 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 CXCL9Q07325 125 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 MFSD14BQ5SR56 506 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 VPS53Q5VIR6 699 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 STRIP1Q5VSL9 837 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 RNF20Q5VTR2 975 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 WDR66Q8TBY9 1149 aa18.02■□□□□ 0.48
SCAF11-204ENST00000395454 PDS5AQ29RF7 1337 aaKnown RBP18.02■□□□□ 0.47
SCAF11-204ENST00000395454 TIAM2Q8IVF5 1701 aa18.02■□□□□ 0.47
SCAF11-204ENST00000395454 MXD3Q9BW11 206 aa18.02■□□□□ 0.47
SCAF11-204ENST00000395454 ALDH8A1Q9H2A2 487 aaPredicted RBP18.02■□□□□ 0.47
SCAF11-204ENST00000395454 FAM205AQ6ZU69 1335 aa18.01■□□□□ 0.47
SCAF11-204ENST00000395454 PSMD14O00487 310 aa18.01■□□□□ 0.47
SCAF11-204ENST00000395454 ZBTB22O15209 634 aa18.01■□□□□ 0.47
SCAF11-204ENST00000395454 ZFYP08048 801 aaPredicted RBP18.01■□□□□ 0.47
SCAF11-204ENST00000395454 LRRFIP1Q32MZ4 808 aaKnown RBP18.01■□□□□ 0.47
SCAF11-204ENST00000395454 CIAPIN1Q6FI81 312 aa18.01■□□□□ 0.47
SCAF11-204ENST00000395454 TBC1D22AQ8WUA7 517 aa18.01■□□□□ 0.47
SCAF11-204ENST00000395454 RNF113AO15541 343 aaKnown RBP18■□□□□ 0.47
SCAF11-204ENST00000395454 TTF1Q15361 905 aaPredicted RBP18■□□□□ 0.47
SCAF11-204ENST00000395454 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 DACT2Q5SW24 774 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 ZGPATQ8N5A5 531 aaKnown RBP18■□□□□ 0.47
SCAF11-204ENST00000395454 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
SCAF11-204ENST00000395454 PSME4Q14997 1843 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 ZNF541Q9H0D2 1346 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 CASTP20810 708 aaKnown RBP18■□□□□ 0.47
SCAF11-204ENST00000395454 RUFY3Q7L099 469 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 GJA3Q9Y6H8 435 aa18■□□□□ 0.47
SCAF11-204ENST00000395454 MYO5AQ9Y4I1 1855 aaKnown RBP17.99■□□□□ 0.47
SCAF11-204ENST00000395454 DDX11L8A8MPP1 907 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 IDH1O75874 414 aaKnown RBP17.99■□□□□ 0.47
SCAF11-204ENST00000395454 PSMA5P28066 241 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 PRDX5P30044 214 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 AK2P54819 239 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 TNIP1Q15025 636 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
SCAF11-204ENST00000395454 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
SCAF11-204ENST00000395454 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
SCAF11-204ENST00000395454 CYP46A1Q9Y6A2 500 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 SALL1Q9NSC2 1324 aa17.99■□□□□ 0.47
SCAF11-204ENST00000395454 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-204ENST00000395454 CHGBP05060 677 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 VIL1P09327 827 aaKnown RBP17.98■□□□□ 0.47
SCAF11-204ENST00000395454 CERS5Q8N5B7 392 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 SEC62Q99442 399 aaKnown RBP17.98■□□□□ 0.47
SCAF11-204ENST00000395454 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 MAST3O60307 1309 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 ZNF646O15015 1829 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-204ENST00000395454 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 KRT32Q14532 448 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms