RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SH3TC1Q8TE82 1336 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 GPAA1O43292 621 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 A1BGP04217 495 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 NLRP12P59046 1061 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 ERLIN1O75477 346 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 C11orf57Q6ZUT1 292 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 PGBD1Q96JS3 809 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 SRRTQ9BXP5 876 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 ABCF2Q9UG63 623 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 PCDHA7Q9UN72 937 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 ANGEL1Q9UNK9 670 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 TSGA10IPQ3SY00 556 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 CNNM2Q9H8M5 875 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 GPR108Q9NPR9 543 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 ERBB3P21860 1342 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 RXRAP19793 462 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 FANCCQ00597 558 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 NOL10Q9BSC4 688 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 KRT23Q9C075 422 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 AK7Q96M32 723 aa13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.268e-9■□□□□ 8.1
UBE2D3-209ENST00000394804 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-209ENST00000394804 KIF5CO60282 957 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 WTAPQ15007 396 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 RTN1Q16799 776 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 HSP90AA4PQ58FG1 418 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 A0A1W2PQ27 194 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 A0A1W2PQ64 194 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 A0A1W2PQD8 194 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 IGSF3O75054 1194 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 CWC15Q9P013 229 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
UBE2D3-209ENST00000394804 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 CARMIL3Q8ND23 1372 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 MAST3O60307 1309 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 ELF2Q15723 593 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 LRRC24Q50LG9 513 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 KCNB2Q92953 911 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 TMEM87BQ96K49 555 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 MARCH6O60337 910 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 ZAP70P43403 619 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 B4E1Z4 1266 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 KIF20AO95235 890 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 NDUFA8P51970 172 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 STIM1Q13586 685 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-209ENST00000394804 MED23Q9ULK4 1368 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 SARM1Q6SZW1 724 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 IL2RBP14784 551 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 IQCA1Q86XH1 822 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 UTP14AQ9BVJ6 771 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 KCNF1Q9H3M0 494 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 MON2Q7Z3U7 1717 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 PFKFB1P16118 471 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 KRT40Q6A162 431 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 CAGE1Q8TC20 777 aa13.38□□□□□ -0.27
UBE2D3-209ENST00000394804 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 FGAP02671 866 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 GABPB1Q06547 395 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CCDC12Q8WUD4 166 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CUTAO60888 179 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 SYCP1Q15431 976 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 A0A087WWV3 80 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 RANBP6O60518 1105 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CMA1P23946 247 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.277e-7■■■□□ 15.7
UBE2D3-209ENST00000394804 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 FUCA2Q9BTY2 467 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CALCOCO1Q9P1Z2 691 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 KAT6BQ8WYB5 2073 aa13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-209ENST00000394804 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms