RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 BIN2Q9UBW5 565 aaPredicted RBP6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 ERICH3Q5RHP9 1530 aa6.38□□□□□ -1.39
GAPVD1-206ENST00000394104 CHMP2AO43633 222 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 EPB41P11171 864 aaKnown RBP6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 SPAG1Q07617 926 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 BIRC3Q13489 604 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 KMT5BQ4FZB7 885 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 JAG2Q9Y219 1238 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 RABGAP1Q9Y3P9 1069 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 PLEKHH2Q8IVE3 1493 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 ANXA1P04083 346 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 KLHL40Q2TBA0 621 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 MCMDC2Q4G0Z9 681 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 MAGEB6Q8N7X4 407 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 SAP30BPQ9UHR5 308 aaKnown RBP6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 LUC7L2Q9Y383 392 aaKnown RBP6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 EMILIN1Q9Y6C2 1016 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 WDR97A6NE52 1622 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 TYRO3Q06418 890 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 APOBRQ0VD83 1088 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 PRR16Q569H4 304 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 GPIHBP1Q8IV16 184 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 ZGPATQ8N5A5 531 aaKnown RBP6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 FNBP1Q96RU3 617 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 USTQ9Y2C2 406 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 RTL9Q8NET4 1388 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 CAVIN2O95810 425 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 TNFAIP3P21580 790 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 ASIC2Q16515 512 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 CCDC62Q6P9F0 684 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 DTHD1Q6ZMT9 781 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 MAEAQ7L5Y9 396 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 HS2ST1Q7LGA3 356 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 AFAP1L2Q8N4X5 818 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 MIGA1Q8NAN2 632 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 MCUR1Q96AQ8 359 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 TRIM31Q9BZY9 425 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 A0A1B0GUL7 405 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 PI4KAP2A4QPH2 592 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 CCDC169A6NNP5 214 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 GIPC1O14908 333 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 SPTLC2O15270 562 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 STX10O60499 249 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 ZNF804AQ7Z570 1209 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 TMTC2Q8N394 836 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 PI4KAP1Q8N8J0 262 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 GSDMBQ8TAX9 411 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.393e-6■□□□□ 8.6
GAPVD1-206ENST00000394104 ANKFY1Q9P2R3 1169 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 TTLL3Q9Y4R7 772 aa6.37□□□□□ -1.39
GAPVD1-206ENST00000394104 FAM83GA6ND36 823 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 STK10O94804 968 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 F13A1P00488 732 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 MAN1A1P33908 653 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CASC4Q6P4E1 433 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 FAM200AQ8TCP9 573 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 MGARPQ8TDB4 240 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 SETDB2Q96T68 719 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CCDC94Q9BW85 323 aaPredicted RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 HFM1A2PYH4 1435 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 TRIM75PA6NK02 468 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 IGHDP01880 384 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 ANKRD24Q8TF21 1146 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 PPME1Q9Y570 386 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 PIK3R4Q99570 1358 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 SUPT6HQ7KZ85 1726 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 SDSP20132 328 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 NMIQ13287 307 aaPredicted RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 ZNF174Q15697 407 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 NOC4LQ9BVI4 516 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 AKR1B15C9JRZ8 316 aaPredicted RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CETN3O15182 167 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 ATP6V1AP38606 617 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 GNAQP50148 359 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 MAP7Q14244 749 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 LONRF3Q496Y0 759 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 OGFOD1Q8N543 542 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 UIMC1Q96RL1 719 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CSRNP2Q9H175 543 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 RASSF4Q9H2L5 321 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 STK38LQ9Y2H1 464 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CAMSAP2Q08AD1 1489 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 SYNJ2O15056 1496 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 PRIM1P49642 420 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 B4GALNT4Q76KP1 1039 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 BAG1Q99933 345 aaPredicted RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 LAMC3Q9Y6N6 1575 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 VWA3AA6NCI4 1184 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CCNT1O60563 726 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 SLC9C2Q5TAH2 1124 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 HHATQ5VTY9 493 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 NACA2Q9H009 215 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 VPS16Q9H269 839 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 CHPF2Q9P2E5 772 aa6.36□□□□□ -1.39
GAPVD1-206ENST00000394104 DDX39AO00148 427 aaKnown RBP6.35□□□□□ -1.39
GAPVD1-206ENST00000394104 U2AF2P26368 475 aaKnown RBP eCLIP6.35□□□□□ -1.391e-6■■■□□ 15.4
GAPVD1-206ENST00000394104 EVCP57679 992 aa6.35□□□□□ -1.39
GAPVD1-206ENST00000394104 SV2BQ7L1I2 683 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms