RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 NWD2Q9ULI1 1742 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 ZNF202O95125 648 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 TMC6Q7Z403 805 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 POLR3EQ9NVU0 708 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 YEATS4O95619 227 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 ANO1Q5XXA6 986 aa16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 PFKFB1P16118 471 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 MCAMP43121 646 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 TICAM2Q86XR7 235 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 DNAJC10Q8IXB1 793 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 FBXL16Q8N461 479 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 ZHX1Q9UKY1 873 aaPredicted RBP16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 NEDD4P46934 1319 aa16.19■□□□□ 0.18
GAPVD1-205ENST00000394084 WDHD1O75717 1129 aaPredicted RBP16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 TRDNQ13061 729 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 LDHAL6AQ6ZMR3 332 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 BRAPQ7Z569 592 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 PHKBQ93100 1093 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 SENP2Q9HC62 589 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 ABCC6O95255 1503 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 NYAP1Q6ZVC0 841 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 CYB5R4Q7L1T6 521 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 ALG1Q9BT22 464 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 ZNF215Q9UL58 517 aaPredicted RBP16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 MICU3Q86XE3 530 aa16.18■□□□□ 0.18
GAPVD1-205ENST00000394084 IL2RBP14784 551 aa16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 GNL2Q13823 731 aaKnown RBP16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 GREM2Q9H772 168 aa16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 INCENPQ9NQS7 918 aa16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 CNNM1Q9NRU3 951 aa16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 PCCAP05165 728 aaPredicted RBP16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 METAP2P50579 478 aaKnown RBP eCLIP16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 MYL10Q9BUA6 226 aa16.17■□□□□ 0.18
GAPVD1-205ENST00000394084 CPDO75976 1380 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 B4E1Z4 1266 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 IGSF3O75054 1194 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 ITGA6P23229 1130 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 NLRP12P59046 1061 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.16■□□□□ 0.187e-7■■■■■ 32.5
GAPVD1-205ENST00000394084 PIH1D3Q9NQM4 214 aaKnown RBP16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 SPEF2Q9C093 1822 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 GSDMDP57764 484 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 HLFQ16534 295 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 UBE2Q2LH0YL09 131 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 NPHP1O15259 732 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 ARMCX5Q6P1M9 558 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 ANGEL1Q9UNK9 670 aaKnown RBP16.16■□□□□ 0.18
GAPVD1-205ENST00000394084 ATP1A3P13637 1013 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 CDC27P30260 824 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 ADD2P35612 726 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 DMTNQ08495 405 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 KRT40Q6A162 431 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 CSF1RP07333 972 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 CMA1P23946 247 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 PTPN21Q16825 1174 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 NFXL1Q6ZNB6 911 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 CLIC6Q96NY7 704 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
GAPVD1-205ENST00000394084 SYKP43405 635 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 NCAPHQ15003 741 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 SYCP1Q15431 976 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 RIPOR2Q9Y4F9 1068 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 ZMYM6O95789 1325 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 ZNF532Q9HCE3 1301 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 TPM4P67936 248 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 E4F1Q66K89 784 aaPredicted RBP16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 HELBQ8NG08 1087 aaPredicted RBP16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 KIF18AQ8NI77 898 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
GAPVD1-205ENST00000394084 PARP4Q9UKK3 1724 aaKnown RBP16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 SH2B2O14492 632 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms