RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 LMTK3Q96Q04 1460 aa21.8■■□□□ 1.08
SMARCC2-203ENST00000394023 VSIG10Q8N0Z9 540 aa21.8■■□□□ 1.08
SMARCC2-203ENST00000394023 KCNG4Q8TDN1 519 aa21.8■■□□□ 1.08
SMARCC2-203ENST00000394023 CRKLP46109 303 aaKnown RBP21.8■■□□□ 1.08
SMARCC2-203ENST00000394023 BRMS1Q9HCU9 246 aa21.8■■□□□ 1.08
SMARCC2-203ENST00000394023 PIH1D3Q9NQM4 214 aaKnown RBP21.79■■□□□ 1.08
SMARCC2-203ENST00000394023 LOC102724428A0A0B4J2F2 783 aa21.79■■□□□ 1.08
SMARCC2-203ENST00000394023 SYKP43405 635 aa21.79■■□□□ 1.08
SMARCC2-203ENST00000394023 SIK1P57059 783 aa21.79■■□□□ 1.08
SMARCC2-203ENST00000394023 RTN1Q16799 776 aa21.79■■□□□ 1.08
SMARCC2-203ENST00000394023 ST3GAL1Q11201 340 aa21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 CNNM3Q8NE01 707 aa21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 WASF1Q92558 559 aa21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 RNF41Q9H4P4 317 aaPredicted RBP21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 FAM160A1Q05DH4 1040 aa21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 LTN1O94822 1766 aa21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 RESTQ13127 1097 aa21.78■■□□□ 1.08
SMARCC2-203ENST00000394023 GYG1P46976 350 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 AIFM3Q96NN9 605 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 SPECC1Q5M775 1068 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 SUSD4Q5VX71 490 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 CCDC196A0A1B0GTZ2 297 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 CASP7P55210 303 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 CFAP100Q494V2 611 aa21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
SMARCC2-203ENST00000394023 CYP19A1P11511 503 aaPredicted RBP21.77■■□□□ 1.07
SMARCC2-203ENST00000394023 KRT23Q9C075 422 aa21.77■■□□□ 1.07
SMARCC2-203ENST00000394023 MRVI1Q9Y6F6 885 aa21.77■■□□□ 1.07
SMARCC2-203ENST00000394023 hCG_1642624A0A1W2PR95 340 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 DZIP1Q86YF9 867 aaKnown RBP21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 PGBD1Q96JS3 809 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 PRKAB2O43741 272 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 IL6STP40189 918 aaPredicted RBP21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 FAM182BQ5T319 152 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 USPL1Q5W0Q7 1092 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 SETDB2Q96T68 719 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 MAGEB6P1A0A0J9YX57 407 aa21.76■■□□□ 1.07
SMARCC2-203ENST00000394023 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 SDR42E1Q8WUS8 393 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 FBXO3Q9UK99 471 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 CLIC4Q9Y696 253 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 OVOS2A0A0G2JMS6 1433 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 LMOD1P29536 600 aaPredicted RBP21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 ADD2P35612 726 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 KLHL10Q6JEL2 608 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 TFCP2L1Q9NZI6 479 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 MROH5Q6ZUA9 1318 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 TSGA10IPQ3SY00 556 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 FAM177A1Q8N128 213 aaPredicted RBP21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 NLRP3Q96P20 1036 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 KRT40Q6A162 431 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 IFNL3Q8IZI9 196 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 CNNM2Q9H8M5 875 aa21.75■■□□□ 1.07
SMARCC2-203ENST00000394023 ANO1Q5XXA6 986 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 PDLIM2Q96JY6 352 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 NALCNQ8IZF0 1738 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 USP5P45974 858 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 TMC6Q7Z403 805 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 PCDHA7Q9UN72 937 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 KCNJ14Q9UNX9 436 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 PARP10Q53GL7 1025 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 MYSM1Q5VVJ2 828 aa21.74■■□□□ 1.07
SMARCC2-203ENST00000394023 CARMIL3Q8ND23 1372 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 ELP1O95163 1332 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 CATIPQ7Z7H3 387 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 ESR2Q92731 530 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 KCNB2Q92953 911 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 LRMPQ12912 555 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 TSC1Q92574 1164 aa21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 SMARCC1Q92922 1105 aaPredicted RBP21.73■■□□□ 1.07
SMARCC2-203ENST00000394023 TNNT1P13805 278 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 BRAPQ7Z569 592 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 CCAR2Q8N163 923 aaKnown RBP21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 FBXO18Q8NFZ0 1043 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 RASGRF1Q13972 1273 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 GNPATO15228 680 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 CHRNDQ07001 517 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 CTCFLQ8NI51 663 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 TMX4Q9H1E5 349 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 RIPOR2Q9Y4F9 1068 aa21.72■■□□□ 1.07
SMARCC2-203ENST00000394023 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 SMTNL1A8MU46 457 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 PATL2C9JE40 543 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 IFIT1BQ5T764 474 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 LRP10Q7Z4F1 713 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 CCDC112Q8NEF3 446 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 MKNK2Q9HBH9 465 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 NRBP1Q9UHY1 535 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 TRIM28Q13263 835 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 TMEM87BQ96K49 555 aa21.71■■□□□ 1.07
SMARCC2-203ENST00000394023 ZNF500O60304 480 aaPredicted RBP21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 CAVIN2O95810 425 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 UBE3CQ15386 1083 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 CPDO75976 1380 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 MARCH6O60337 910 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 ZNF202O95125 648 aa21.7■■□□□ 1.06
SMARCC2-203ENST00000394023 SFPQP23246 707 aaKnown RBP eCLIP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms