RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ALX1Q15699 326 aa20.81■□□□□ 0.92
MBD4-202ENST00000393278 TMED8Q6PL24 325 aaPredicted RBP20.81■□□□□ 0.92
MBD4-202ENST00000393278 ZGPATQ8N5A5 531 aaKnown RBP20.81■□□□□ 0.92
MBD4-202ENST00000393278 ARMT1Q9H993 441 aa20.81■□□□□ 0.92
MBD4-202ENST00000393278 CD209Q9NNX6 404 aa20.81■□□□□ 0.92
MBD4-202ENST00000393278 ZMYM6O95789 1325 aa20.81■□□□□ 0.92
MBD4-202ENST00000393278 PATL2C9JE40 543 aaKnown RBP20.8■□□□□ 0.92
MBD4-202ENST00000393278 IGSF3O75054 1194 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 ANKRD1Q15327 319 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 NAA16Q6N069 864 aaPredicted RBP20.8■□□□□ 0.92
MBD4-202ENST00000393278 ADGRA1Q86SQ6 560 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 LCORLQ8N3X6 602 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 WDR66Q8TBY9 1149 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 ZNF384Q8TF68 577 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 SLC16A10Q8TF71 515 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 ZNF622Q969S3 477 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■■■□ 19.4
MBD4-202ENST00000393278 NSUN4Q96CB9 384 aaKnown RBP20.8■□□□□ 0.92
MBD4-202ENST00000393278 MAST2Q6P0Q8 1798 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 C6orf229H3BNL8 230 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 IL1R1P14778 569 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
MBD4-202ENST00000393278 ZSCAN31Q96LW9 406 aaPredicted RBP20.8■□□□□ 0.92
MBD4-202ENST00000393278 DUOX1Q9NRD9 1551 aa20.79■□□□□ 0.92
MBD4-202ENST00000393278 ZNF213O14771 459 aa20.79■□□□□ 0.92
MBD4-202ENST00000393278 APPP05067 770 aa20.79■□□□□ 0.92
MBD4-202ENST00000393278 PRDX5P30044 214 aa20.79■□□□□ 0.92
MBD4-202ENST00000393278 SPTY2D1Q68D10 685 aaPredicted RBP20.79■□□□□ 0.92
MBD4-202ENST00000393278 MPNDQ8N594 471 aa20.79■□□□□ 0.92
MBD4-202ENST00000393278 TCEANC2Q96MN5 208 aa20.79■□□□□ 0.92
MBD4-202ENST00000393278 LARP6Q9BRS8 491 aaKnown RBP20.79■□□□□ 0.92
MBD4-202ENST00000393278 LAMA4Q16363 1823 aa20.78■□□□□ 0.92
MBD4-202ENST00000393278 MAGEB6P1A0A0J9YX57 407 aa20.78■□□□□ 0.92
MBD4-202ENST00000393278 HAND2P61296 217 aa20.78■□□□□ 0.92
MBD4-202ENST00000393278 MECOMQ03112 1051 aa20.78■□□□□ 0.92
MBD4-202ENST00000393278 TOB2Q14106 344 aaPredicted RBP20.78■□□□□ 0.92
MBD4-202ENST00000393278 DHX32Q7L7V1 743 aaKnown RBP20.78■□□□□ 0.92
MBD4-202ENST00000393278 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
MBD4-202ENST00000393278 SH2B1Q9NRF2 756 aaPredicted RBP20.78■□□□□ 0.92
MBD4-202ENST00000393278 GSG1L2A8MUP6 293 aa20.77■□□□□ 0.92
MBD4-202ENST00000393278 NFKBIBQ15653 356 aa20.77■□□□□ 0.92
MBD4-202ENST00000393278 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
MBD4-202ENST00000393278 IFNL3Q8IZI9 196 aa20.77■□□□□ 0.92
MBD4-202ENST00000393278 RIOK1Q9BRS2 568 aaKnown RBP20.77■□□□□ 0.92
MBD4-202ENST00000393278 TMX4Q9H1E5 349 aaPredicted RBP20.77■□□□□ 0.92
MBD4-202ENST00000393278 JAG2Q9Y219 1238 aa20.77■□□□□ 0.92
MBD4-202ENST00000393278 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.92
MBD4-202ENST00000393278 LARGE1O95461 756 aa20.77■□□□□ 0.91
MBD4-202ENST00000393278 CHRNA5P30532 468 aa20.77■□□□□ 0.91
MBD4-202ENST00000393278 NBR1Q14596 966 aa20.77■□□□□ 0.91
MBD4-202ENST00000393278 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.91
MBD4-202ENST00000393278 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.91
MBD4-202ENST00000393278 SLC4A4Q9Y6R1 1079 aa20.77■□□□□ 0.91
MBD4-202ENST00000393278 PRKAB2O43741 272 aa20.76■□□□□ 0.91
MBD4-202ENST00000393278 EXOSC10Q01780 885 aaKnown RBP20.76■□□□□ 0.91
MBD4-202ENST00000393278 RAB3GAP1Q15042 981 aa20.76■□□□□ 0.91
MBD4-202ENST00000393278 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
MBD4-202ENST00000393278 NAPBQ9H115 298 aa20.76■□□□□ 0.91
MBD4-202ENST00000393278 CCDC88AQ3V6T2 1871 aa20.75■□□□□ 0.91
MBD4-202ENST00000393278 Q6ZUG5 572 aa20.75■□□□□ 0.91
MBD4-202ENST00000393278 DZIP1Q86YF9 867 aaKnown RBP20.75■□□□□ 0.91
MBD4-202ENST00000393278 NACAP1Q9BZK3 213 aa20.75■□□□□ 0.91
MBD4-202ENST00000393278 NBPF3Q9H094 633 aa20.75■□□□□ 0.91
MBD4-202ENST00000393278 KIAA1551Q9HCM1 1747 aa20.74■□□□□ 0.91
MBD4-202ENST00000393278 LDHBP07195 334 aaKnown RBP20.74■□□□□ 0.91
MBD4-202ENST00000393278 ME3Q16798 604 aa20.74■□□□□ 0.91
MBD4-202ENST00000393278 COA1Q9GZY4 146 aa20.74■□□□□ 0.91
MBD4-202ENST00000393278 NUCB2P80303 420 aa20.73■□□□□ 0.91
MBD4-202ENST00000393278 AGXT2Q9BYV1 514 aa20.73■□□□□ 0.91
MBD4-202ENST00000393278 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
MBD4-202ENST00000393278 SLX4Q8IY92 1834 aa20.73■□□□□ 0.91
MBD4-202ENST00000393278 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
MBD4-202ENST00000393278 TBC1D10CQ8IV04 446 aa20.73■□□□□ 0.91
MBD4-202ENST00000393278 NCOA7Q8NI08 942 aa20.73■□□□□ 0.91
MBD4-202ENST00000393278 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.73■□□□□ 0.91
MBD4-202ENST00000393278 FAM205AQ6ZU69 1335 aa20.72■□□□□ 0.91
MBD4-202ENST00000393278 RIMBP2O15034 1052 aa20.72■□□□□ 0.91
MBD4-202ENST00000393278 TDO2P48775 406 aa20.72■□□□□ 0.91
MBD4-202ENST00000393278 ST3GAL1Q11201 340 aa20.72■□□□□ 0.91
MBD4-202ENST00000393278 MB21D2Q8IYB1 491 aaPredicted RBP20.72■□□□□ 0.91
MBD4-202ENST00000393278 TIAM2Q8IVF5 1701 aa20.72■□□□□ 0.91
MBD4-202ENST00000393278 RALYLQ86SE5 291 aaKnown RBP20.71■□□□□ 0.91
MBD4-202ENST00000393278 CCDC83Q8IWF9 413 aa20.71■□□□□ 0.91
MBD4-202ENST00000393278 FBXL16Q8N461 479 aa20.71■□□□□ 0.91
MBD4-202ENST00000393278 TBC1D22AQ8WUA7 517 aa20.71■□□□□ 0.91
MBD4-202ENST00000393278 EYA3Q99504 573 aa20.71■□□□□ 0.91
MBD4-202ENST00000393278 LRRC2Q9BYS8 371 aa20.71■□□□□ 0.91
MBD4-202ENST00000393278 WDR19Q8NEZ3 1342 aa20.71■□□□□ 0.91
MBD4-202ENST00000393278 GSTO1P78417 241 aa20.7■□□□□ 0.91
MBD4-202ENST00000393278 GRIK5Q16478 980 aa20.7■□□□□ 0.91
MBD4-202ENST00000393278 SDR42E1Q8WUS8 393 aa20.7■□□□□ 0.91
MBD4-202ENST00000393278 C7orf43Q8WVR3 580 aa20.7■□□□□ 0.91
MBD4-202ENST00000393278 TNPO1Q92973 898 aaKnown RBP20.7■□□□□ 0.91
MBD4-202ENST00000393278 BRF1Q92994 677 aa20.7■□□□□ 0.91
MBD4-202ENST00000393278 DLEC1Q9Y238 1755 aa20.7■□□□□ 0.9
MBD4-202ENST00000393278 MCM5P33992 734 aa20.7■□□□□ 0.9
MBD4-202ENST00000393278 FGD1P98174 961 aa20.7■□□□□ 0.9
MBD4-202ENST00000393278 TRDNQ13061 729 aa20.7■□□□□ 0.9
MBD4-202ENST00000393278 GIMAP6Q6P9H5 292 aa20.7■□□□□ 0.9
MBD4-202ENST00000393278 AATFQ9NY61 560 aaKnown RBP eCLIP20.7■□□□□ 0.9
MBD4-202ENST00000393278 PKP1Q13835 747 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms