RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 NECTIN1Q15223 517 aa23.48■■□□□ 1.35
CSNK1D-203ENST00000392334 ANKIB1Q9P2G1 1089 aa23.48■■□□□ 1.35
CSNK1D-203ENST00000392334 CNPY2Q9Y2B0 182 aa23.48■■□□□ 1.35
CSNK1D-203ENST00000392334 A0A1B0GUL6 1792 aa23.48■■□□□ 1.35
CSNK1D-203ENST00000392334 CPA1P15085 419 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 CHRNA5P30532 468 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 VPS37DQ86XT2 251 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 SH2B1Q9NRF2 756 aaPredicted RBP23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 HELLSQ9NRZ9 838 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 MAST3O60307 1309 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 ADCK5Q3MIX3 580 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 SLC9C2Q5TAH2 1124 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 TAF6LQ9Y6J9 622 aa23.47■■□□□ 1.35
CSNK1D-203ENST00000392334 PUS7LQ9H0K6 701 aaKnown RBP23.46■■□□□ 1.35
CSNK1D-203ENST00000392334 ZSWIM6Q9HCJ5 1215 aa23.46■■□□□ 1.35
CSNK1D-203ENST00000392334 UTRNP46939 3433 aa23.46■■□□□ 1.35
CSNK1D-203ENST00000392334 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
CSNK1D-203ENST00000392334 FOXD4L6Q3SYB3 417 aaPredicted RBP23.45■■□□□ 1.35
CSNK1D-203ENST00000392334 CAVIN4Q5BKX8 364 aa23.45■■□□□ 1.35
CSNK1D-203ENST00000392334 FOXD4L3Q6VB84 417 aaPredicted RBP23.45■■□□□ 1.35
CSNK1D-203ENST00000392334 C2CD5Q86YS7 1000 aa23.45■■□□□ 1.35
CSNK1D-203ENST00000392334 FAM84BQ96KN1 310 aaPredicted RBP23.45■■□□□ 1.35
CSNK1D-203ENST00000392334 ANKRD2Q9GZV1 360 aa23.45■■□□□ 1.35
CSNK1D-203ENST00000392334 CACNA1SQ13698 1873 aa23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 TTF1Q15361 905 aaPredicted RBP23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 TXNRD3Q86VQ6 643 aa23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 CRAMP1Q96RY5 1269 aa23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 MAP7D2Q96T17 732 aa23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 WWC3Q9ULE0 1092 aa23.45■■□□□ 1.34
CSNK1D-203ENST00000392334 SLC27A2O14975 620 aa23.44■■□□□ 1.34
CSNK1D-203ENST00000392334 PTMAP06454 111 aaKnown RBP23.44■■□□□ 1.34
CSNK1D-203ENST00000392334 PDIA4P13667 645 aaKnown RBP23.44■■□□□ 1.34
CSNK1D-203ENST00000392334 NPR1P16066 1061 aa23.44■■□□□ 1.34
CSNK1D-203ENST00000392334 ZNF622Q969S3 477 aaKnown RBP eCLIP23.44■■□□□ 1.349e-8■□□□□ 10
CSNK1D-203ENST00000392334 GPR101Q96P66 508 aaPredicted RBP23.44■■□□□ 1.34
CSNK1D-203ENST00000392334 ZNF804BA4D1E1 1349 aa23.44■■□□□ 1.34
CSNK1D-203ENST00000392334 KIAA2012Q0VF49 1180 aa23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 SASS6Q6UVJ0 657 aa23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 MASTLQ96GX5 879 aa23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.43■■□□□ 1.345e-10■□□□□ 9.7
CSNK1D-203ENST00000392334 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 H0YIN7 160 aa23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 COL9A3Q14050 684 aaPredicted RBP23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 JAKMIP1Q96N16 626 aaKnown RBP23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 PDRG1Q9NUG6 133 aa23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 ARAP2Q8WZ64 1704 aa23.43■■□□□ 1.34
CSNK1D-203ENST00000392334 ZFYP08048 801 aaPredicted RBP23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 ZKSCAN1P17029 563 aaPredicted RBP23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 LARP6Q9BRS8 491 aaKnown RBP23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 CYP46A1Q9Y6A2 500 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 C10orf71Q711Q0 1435 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 ZNF532Q9HCE3 1301 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 DYNC1I1O14576 645 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 BBOX1O75936 387 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 LARGE1O95461 756 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 ADD2P35612 726 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 APPBP2Q92624 585 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 FUCA2Q9BTY2 467 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 ABCF2Q9UG63 623 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 MTMR6Q9Y217 621 aa23.42■■□□□ 1.34
CSNK1D-203ENST00000392334 UQCRHLA0A096LP55 91 aa23.41■■□□□ 1.34
CSNK1D-203ENST00000392334 UQCRHP07919 91 aa23.41■■□□□ 1.34
CSNK1D-203ENST00000392334 HSPD1P10809 573 aaKnown RBP23.41■■□□□ 1.34
CSNK1D-203ENST00000392334 POLD1P28340 1107 aa23.41■■□□□ 1.34
CSNK1D-203ENST00000392334 JAG2Q9Y219 1238 aa23.41■■□□□ 1.34
CSNK1D-203ENST00000392334 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 PDE6AP16499 860 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 GJB2P29033 226 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 GPSM2P81274 684 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 SGIP1Q9BQI5 828 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 GNL3LQ9NVN8 582 aaKnown RBP23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 LRP2BPQ9P2M1 347 aa23.4■■□□□ 1.34
CSNK1D-203ENST00000392334 PPEF1O14829 653 aaPredicted RBP23.39■■□□□ 1.34
CSNK1D-203ENST00000392334 ALDH1B1P30837 517 aa23.39■■□□□ 1.34
CSNK1D-203ENST00000392334 HIBADHP31937 336 aaKnown RBP23.39■■□□□ 1.34
CSNK1D-203ENST00000392334 ZSCAN25Q6NSZ9 544 aa23.39■■□□□ 1.34
CSNK1D-203ENST00000392334 CCDC83Q8IWF9 413 aa23.39■■□□□ 1.34
CSNK1D-203ENST00000392334 MYO5AQ9Y4I1 1855 aaKnown RBP23.39■■□□□ 1.33
CSNK1D-203ENST00000392334 PTGER2P43116 358 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 FBXO33Q7Z6M2 555 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 PPP1R1BQ9UD71 204 aaPredicted RBP23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 SLX4Q8IY92 1834 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 GPAA1O43292 621 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 CYP21A2P08686 494 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 MAP3K12Q12852 859 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 TTLL5Q6EMB2 1281 aa23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 U3KPZ7 1027 aaPredicted RBP23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 COL1A1P02452 1464 aaPredicted RBP23.38■■□□□ 1.33
CSNK1D-203ENST00000392334 ST3GAL1Q11201 340 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 TICAM2Q86XR7 235 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 PIBF1Q8WXW3 757 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 USP25Q9UHP3 1055 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 XDHP47989 1333 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 TCRBV5S4A2TA0A5A2 114 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms