RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 GIMAP7Q8NHV1 300 aa3.64□□□□□ -1.83
RNU6-1228P-201ENST00000391014 PBXIP1Q96AQ6 731 aa3.64□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SOX17Q9H6I2 414 aaPredicted RBP3.64□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ACTL7BQ9Y614 415 aa3.64□□□□□ -1.83
RNU6-1228P-201ENST00000391014 FZD6O60353 706 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ADH5P11766 374 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 PCSK2P16519 638 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 NPR3P17342 541 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 MAOBP27338 520 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 GRIA4P48058 902 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SPRED3Q2MJR0 410 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SEZ6L2Q6UXD5 910 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ZNF765Q7L2R6 523 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 VSIG10LQ86VR7 867 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 FBXL18Q96ME1 805 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SEMA6CQ9H3T2 930 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ZFYVE28Q9HCC9 887 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 LRRC4CQ9HCJ2 640 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 C1GALT1Q9NS00 363 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 FAM105AQ9NUU6 356 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 CCDC87Q9NVE4 849 aa3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 BSDC1Q9NW68 430 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1228P-201ENST00000391014 A0A096LPE4 126 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 A0A1W2PPZ6 126 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 CARNS1A5YM72 827 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 EDN3P14138 238 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SSFA2P28290 1259 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 CPSF6Q16630 551 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ZNF574Q6ZN55 896 aaPredicted RBP3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 DYMQ7RTS9 669 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SPRED2Q7Z698 418 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 POU5F2Q8N7G0 328 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 TTC16Q8NEE8 873 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 FLCNQ8NFG4 579 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 TCF12Q99081 682 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 METTL22Q9BUU2 404 aaPredicted RBP3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ACSS3Q9H6R3 686 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 LGR6Q9HBX8 967 aa3.62□□□□□ -1.83
RNU6-1228P-201ENST00000391014 CARMIL2Q6F5E8 1435 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 A0A1W2PP55 124 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 TMEM88BA6NKF7 163 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 PAPLNO95428 1278 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 RAB6AP20340 208 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 PCDH1Q08174 1060 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 BNIP3Q12983 259 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 AAMPQ13685 434 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 AKAP4Q5JQC9 854 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 PHLDB3Q6NSJ2 640 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 CCNJLQ8IV13 435 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 SNX29Q8TEQ0 813 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ASIC4Q96FT7 647 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 TRIM56Q9BRZ2 755 aaKnown RBP3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 GSX1Q9H4S2 264 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ANO2Q9NQ90 1003 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 AMOTL2Q9Y2J4 779 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 U3KQE9 123 aa3.61□□□□□ -1.83
RNU6-1228P-201ENST00000391014 POU4F3Q15319 338 aa3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ZNF648Q5T619 568 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 DUSP27Q5VZP5 1158 aa3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 USPL1Q5W0Q7 1092 aa3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ALKBH2Q6NS38 261 aa3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 BCL7CQ8WUZ0 217 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 CLEC4MQ9H2X3 399 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 PPP1R9AQ9ULJ8 1098 aa3.6□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ARID3CA6NKF2 412 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 EIF4EBP3O60516 100 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 JUNBP17275 347 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ASPAP45381 313 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 MAP7Q14244 749 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 ZNF124Q15973 351 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 OGFOD3Q6PK18 319 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 GALNT12Q8IXK2 581 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 GJD3Q8N144 294 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 WDR89Q96FK6 387 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 YIPF2Q9BWQ6 316 aa3.59□□□□□ -1.83
RNU6-1228P-201ENST00000391014 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 AOC2O75106 756 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 FAM13AO94988 1023 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 CYP11A1P05108 521 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 CD96P40200 585 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 FKBP4Q02790 459 aaKnown RBP eCLIP3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 EHHADHQ08426 723 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 ECM1Q16610 540 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 ZNF792Q3KQV3 632 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 AGBL5Q8NDL9 886 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 WDR18Q9BV38 432 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 LIN7BQ9HAP6 207 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 RAD18Q9NS91 495 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 AP4E1Q9UPM8 1137 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 SLC5A6Q9Y289 635 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 DAGLAQ9Y4D2 1042 aa3.58□□□□□ -1.84
RNU6-1228P-201ENST00000391014 B3GALT4O96024 378 aa3.57□□□□□ -1.84
RNU6-1228P-201ENST00000391014 CD8BP10966 210 aa3.57□□□□□ -1.84
RNU6-1228P-201ENST00000391014 LIG1P18858 919 aa3.57□□□□□ -1.84
RNU6-1228P-201ENST00000391014 USP5P45974 858 aa3.57□□□□□ -1.84
RNU6-1228P-201ENST00000391014 CYP27A1Q02318 531 aa3.57□□□□□ -1.84
RNU6-1228P-201ENST00000391014 CDK5R2Q13319 367 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms