RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CCT2P78371 535 aaKnown RBP21.45■■□□□ 1.02
ACTN4-202ENST00000390009 CAVIN4Q5BKX8 364 aa21.45■■□□□ 1.02
ACTN4-202ENST00000390009 FERMT3Q86UX7 667 aa21.45■■□□□ 1.02
ACTN4-202ENST00000390009 NSUN7Q8NE18 718 aaKnown RBP21.45■■□□□ 1.02
ACTN4-202ENST00000390009 DDX11Q96FC9 970 aa21.45■■□□□ 1.02
ACTN4-202ENST00000390009 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
ACTN4-202ENST00000390009 PATL2C9JE40 543 aaKnown RBP21.44■■□□□ 1.02
ACTN4-202ENST00000390009 NPHP1O15259 732 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 ANTXR2P58335 489 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 ALX1Q15699 326 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
ACTN4-202ENST00000390009 TBC1D10CQ8IV04 446 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 ARMT1Q9H993 441 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 GPHNQ9NQX3 736 aaPredicted RBP21.44■■□□□ 1.02
ACTN4-202ENST00000390009 ZMYM6O95789 1325 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 CARMIL3Q8ND23 1372 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 COL1A1P02452 1464 aaPredicted RBP21.44■■□□□ 1.02
ACTN4-202ENST00000390009 CTDNEP1O95476 244 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 TRDNQ13061 729 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 FAM184AQ8NB25 1140 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 WDR19Q8NEZ3 1342 aa21.44■■□□□ 1.02
ACTN4-202ENST00000390009 ADRA2BP18089 450 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 VPS37DQ86XT2 251 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 NCOA5Q9HCD5 579 aaKnown RBP21.43■■□□□ 1.02
ACTN4-202ENST00000390009 EPB41L4AQ9HCS5 686 aaPredicted RBP21.43■■□□□ 1.02
ACTN4-202ENST00000390009 TM4SF1P30408 202 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 UBE2HP62256 183 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 HMGN5P82970 282 aaKnown RBP21.43■■□□□ 1.02
ACTN4-202ENST00000390009 NFIXQ14938 502 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 IFNL3Q8IZI9 196 aa21.43■■□□□ 1.02
ACTN4-202ENST00000390009 FAM84BQ96KN1 310 aaPredicted RBP21.43■■□□□ 1.02
ACTN4-202ENST00000390009 PTPDC1A2A3K4 754 aa21.42■■□□□ 1.02
ACTN4-202ENST00000390009 PNPLA7Q6ZV29 1317 aa21.42■■□□□ 1.02
ACTN4-202ENST00000390009 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
ACTN4-202ENST00000390009 ABCF2Q9UG63 623 aa21.42■■□□□ 1.02
ACTN4-202ENST00000390009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.41■■□□□ 1.02
ACTN4-202ENST00000390009 LCORLQ8N3X6 602 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 CHMP4CQ96CF2 233 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 NAPBQ9H115 298 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 DENND2AQ9ULE3 1009 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 SALL1Q9NSC2 1324 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 GNAT2P19087 354 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
ACTN4-202ENST00000390009 SYCE3A1L190 88 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 H3BQV1 296 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 KRT85P78386 507 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 IFFO2Q5TF58 517 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 FAM173BQ6P4H8 233 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 KRT27Q7Z3Y8 459 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 KLF18A0A0U1RQI7 1052 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 CYP7A1P22680 504 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 KLRK1P26718 216 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 FBXO33Q7Z6M2 555 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 CNBD1Q8NA66 436 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 RAI14Q9P0K7 980 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 KIF3AQ9Y496 699 aa21.4■■□□□ 1.02
ACTN4-202ENST00000390009 TIAM2Q8IVF5 1701 aa21.39■■□□□ 1.02
ACTN4-202ENST00000390009 PRKAB2O43741 272 aa21.39■■□□□ 1.01
ACTN4-202ENST00000390009 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.01
ACTN4-202ENST00000390009 MIGA1Q8NAN2 632 aa21.39■■□□□ 1.01
ACTN4-202ENST00000390009 SLC4A4Q9Y6R1 1079 aa21.39■■□□□ 1.01
ACTN4-202ENST00000390009 MYH15Q9Y2K3 1946 aa21.39■■□□□ 1.01
ACTN4-202ENST00000390009 LRSAM1Q6UWE0 723 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 CYB5R4Q7L1T6 521 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 ADGRA1Q86SQ6 560 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 NKX2-3Q8TAU0 364 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 NEDD4P46934 1319 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 SEMA3EO15041 775 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 NACAP1Q9BZK3 213 aa21.38■■□□□ 1.01
ACTN4-202ENST00000390009 GOLGA8BA8MQT2 603 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 B4E1Z4 1266 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 TRIM37O94972 964 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 RESTQ13127 1097 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 ANGEL1Q9UNK9 670 aaKnown RBP21.37■■□□□ 1.01
ACTN4-202ENST00000390009 HPS5Q9UPZ3 1129 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 TDO2P48775 406 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 TPRNQ4KMQ1 711 aa21.37■■□□□ 1.01
ACTN4-202ENST00000390009 NAA16Q6N069 864 aaPredicted RBP21.37■■□□□ 1.01
ACTN4-202ENST00000390009 GYS1P13807 737 aa21.36■■□□□ 1.01
ACTN4-202ENST00000390009 CTDSPL2Q05D32 466 aa21.36■■□□□ 1.01
ACTN4-202ENST00000390009 TTC6Q86TZ1 520 aa21.36■■□□□ 1.01
ACTN4-202ENST00000390009 ZSCAN16Q9H4T2 348 aaPredicted RBP21.36■■□□□ 1.01
ACTN4-202ENST00000390009 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
ACTN4-202ENST00000390009 ELP1O95163 1332 aa21.36■■□□□ 1.01
ACTN4-202ENST00000390009 DHX16O60231 1041 aaKnown RBP21.35■■□□□ 1.01
ACTN4-202ENST00000390009 HIBADHP31937 336 aaKnown RBP21.35■■□□□ 1.01
ACTN4-202ENST00000390009 NASPP49321 788 aaPredicted RBP21.35■■□□□ 1.01
ACTN4-202ENST00000390009 PRR5LQ6MZQ0 368 aa21.35■■□□□ 1.01
ACTN4-202ENST00000390009 MAGEB6P1A0A0J9YX57 407 aa21.35■■□□□ 1.01
ACTN4-202ENST00000390009 SH2B2O14492 632 aaPredicted RBP21.35■■□□□ 1.01
ACTN4-202ENST00000390009 PPFIA3O75145 1194 aa21.35■■□□□ 1.01
ACTN4-202ENST00000390009 GRAPQ13588 217 aa21.35■■□□□ 1.01
ACTN4-202ENST00000390009 GRAPLQ8TC17 118 aaPredicted RBP21.35■■□□□ 1.01
ACTN4-202ENST00000390009 SCAND2PQ9GZW5 306 aaPredicted RBP21.35■■□□□ 1.01
ACTN4-202ENST00000390009 INCENPQ9NQS7 918 aa21.35■■□□□ 1.01
ACTN4-202ENST00000390009 PDS5AQ29RF7 1337 aaKnown RBP21.34■■□□□ 1.01
ACTN4-202ENST00000390009 FDPSP14324 419 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms