RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.48
LTN1-203ENST00000389195 CYP7A1P22680 504 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 DDR1Q08345 913 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 TMEM63CQ9P1W3 806 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 THSD7AQ9UPZ6 1657 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 GOLGA6L22H0YM25 854 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 EPB41L2O43491 1005 aaKnown RBP12.03□□□□□ -0.48
LTN1-203ENST00000389195 ZSCAN22P10073 491 aaPredicted RBP12.03□□□□□ -0.48
LTN1-203ENST00000389195 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
LTN1-203ENST00000389195 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
LTN1-203ENST00000389195 NEDD4P46934 1319 aa12.03□□□□□ -0.48
LTN1-203ENST00000389195 PRC1O43663 620 aa12.02□□□□□ -0.48
LTN1-203ENST00000389195 SERPINB2P05120 415 aa12.02□□□□□ -0.48
LTN1-203ENST00000389195 EXOSC10Q01780 885 aaKnown RBP12.02□□□□□ -0.48
LTN1-203ENST00000389195 TSGA10IPQ3SY00 556 aa12.02□□□□□ -0.48
LTN1-203ENST00000389195 SLC4A4Q9Y6R1 1079 aa12.02□□□□□ -0.48
LTN1-203ENST00000389195 BRWD3Q6RI45 1802 aa12.02□□□□□ -0.48
LTN1-203ENST00000389195 MAP3K12Q12852 859 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 AIFM3Q96NN9 605 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 SBF2Q86WG5 1849 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 SYCE3A1L190 88 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 F13A1P00488 732 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 UQCRFS1P1P0C7P4 283 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 IFNL3Q8IZI9 196 aa12.02□□□□□ -0.49
LTN1-203ENST00000389195 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
LTN1-203ENST00000389195 GSG1L2A8MUP6 293 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
LTN1-203ENST00000389195 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 LAMA4Q16363 1823 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 WDR33Q9C0J8 1336 aaKnown RBP12.01□□□□□ -0.49
LTN1-203ENST00000389195 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 ZFYP08048 801 aaPredicted RBP12.01□□□□□ -0.49
LTN1-203ENST00000389195 KRT32Q14532 448 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
LTN1-203ENST00000389195 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 SLC10A5Q5PT55 438 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 COL23A1Q86Y22 540 aaPredicted RBP12.01□□□□□ -0.49
LTN1-203ENST00000389195 NYXQ9GZU5 481 aa12.01□□□□□ -0.49
LTN1-203ENST00000389195 KLF18A0A0U1RQI7 1052 aa12□□□□□ -0.49
LTN1-203ENST00000389195 RIMBP2O15034 1052 aa12□□□□□ -0.49
LTN1-203ENST00000389195 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
LTN1-203ENST00000389195 TDO2P48775 406 aa12□□□□□ -0.49
LTN1-203ENST00000389195 RNF214Q8ND24 703 aa12□□□□□ -0.49
LTN1-203ENST00000389195 ZSCAN31Q96LW9 406 aaPredicted RBP12□□□□□ -0.49
LTN1-203ENST00000389195 NAPBQ9H115 298 aa12□□□□□ -0.49
LTN1-203ENST00000389195 SH2B1Q9NRF2 756 aaPredicted RBP12□□□□□ -0.49
LTN1-203ENST00000389195 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
LTN1-203ENST00000389195 C4BP0C0L5 1744 aa12□□□□□ -0.49
LTN1-203ENST00000389195 UBE3CQ15386 1083 aa12□□□□□ -0.49
LTN1-203ENST00000389195 ZSCAN23Q3MJ62 389 aa12□□□□□ -0.49
LTN1-203ENST00000389195 MICU3Q86XE3 530 aa12□□□□□ -0.49
LTN1-203ENST00000389195 HIBADHP31937 336 aaKnown RBP11.99□□□□□ -0.49
LTN1-203ENST00000389195 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 RALYLQ86SE5 291 aaKnown RBP11.99□□□□□ -0.49
LTN1-203ENST00000389195 PHKBQ93100 1093 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 MXD3Q9BW11 206 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 ZSWIM5Q9P217 1185 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
LTN1-203ENST00000389195 TNRC6CQ9HCJ0 1690 aaKnown RBP11.99□□□□□ -0.49
LTN1-203ENST00000389195 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 GPSM2P81274 684 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 MECOMQ03112 1051 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 KLHL40Q2TBA0 621 aa11.99□□□□□ -0.49
LTN1-203ENST00000389195 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
LTN1-203ENST00000389195 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
LTN1-203ENST00000389195 RREB1Q92766 1687 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 TAF1LQ8IZX4 1826 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 CYP2D6P10635 497 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 POTEAQ6S8J7 498 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 NSUN7Q8NE18 718 aaKnown RBP11.98□□□□□ -0.49
LTN1-203ENST00000389195 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
LTN1-203ENST00000389195 RGS17Q9UGC6 210 aaPredicted RBP11.98□□□□□ -0.49
LTN1-203ENST00000389195 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 hCG_1642624A0A1W2PR95 340 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
LTN1-203ENST00000389195 UBE4AQ14139 1066 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 ANKRD1Q15327 319 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 NCOA7Q8NI08 942 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
LTN1-203ENST00000389195 BCORQ6W2J9 1755 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 F8W031 263 aaPredicted RBP11.97□□□□□ -0.49
LTN1-203ENST00000389195 NMT2O60551 498 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 FDPSP14324 419 aaKnown RBP11.97□□□□□ -0.49
LTN1-203ENST00000389195 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
LTN1-203ENST00000389195 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 MTMR7Q9Y216 660 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 RFX7Q2KHR2 1363 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 H3BQV1 296 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 POLR3DP05423 398 aaPredicted RBP11.97□□□□□ -0.49
LTN1-203ENST00000389195 MCM5P33992 734 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 LRRFIP1Q32MZ4 808 aaKnown RBP11.97□□□□□ -0.49
LTN1-203ENST00000389195 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
LTN1-203ENST00000389195 ZSCAN25Q6NSZ9 544 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 MPNDQ8N594 471 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms