RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SGSM2O43147 1006 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 CFAP157Q5JU67 520 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 VTI1AQ96AJ9 217 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 TBC1D31Q96DN5 1066 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 Q9H521 79 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 SYCE3A1L190 88 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 KRT86O43790 486 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 NEBLO76041 1014 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 IFIT1P09914 478 aaKnown RBP5.52□□□□□ -1.53
PTPRD-203ENST00000381196 GFAPP14136 432 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 RFX1P22670 979 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC129Q6ZRS4 1044 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 UBE4BO95155 1302 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 LMO7Q8WWI1 1683 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 CEP104O60308 925 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 BAG6P46379 1132 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 DZIP1Q86YF9 867 aaKnown RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 NUDT16Q96DE0 195 aaKnown RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CABS1Q96KC9 395 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC28BQ9BUN5 200 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 IGSF3O75054 1194 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 SERPINC1P01008 464 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 FOSBP53539 338 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC77Q9BR77 488 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 TEX13AQ9BXU3 409 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 HOMER3Q9NSC5 361 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 ABLIM1O14639 778 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 ZSCAN22P10073 491 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 HSPA2P54652 639 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 TTC22Q5TAA0 569 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 KRT28Q7Z3Y7 464 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CERS3Q8IU89 383 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 STIM2Q9P246 746 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 A2ML1A8K2U0 1454 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 GOLGA8QA0A0J9YX86 632 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 GOLGA8OA6NCC3 632 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 GOLGA8NF8WBI6 632 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 STX6O43752 255 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 POLR3DP05423 398 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 RRP36Q96EU6 259 aaKnown RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 PDLIM2Q96JY6 352 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 TM6SF1Q9BZW5 370 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC68Q9H2F9 335 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 FEZ2Q9UHY8 353 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC61Q9Y6R9 512 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 ANKRD62A6NC57 917 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 SAMD15Q9P1V8 674 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CYLC1P35663 651 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 FKBP15Q5T1M5 1219 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 RUFY3Q7L099 469 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 UBAC1Q9BSL1 405 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 INPP5BP32019 993 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC97Q96F63 343 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 TPX2Q9ULW0 747 aaKnown RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 VPS37CA5D8V6 355 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 KDM4AO75164 1064 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 MYL1P05976 194 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CA8P35219 290 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 USP5P45974 858 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 NEK4P51957 841 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 VWA3BQ502W6 1294 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 RAB34Q9BZG1 259 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 PARP2Q9UGN5 583 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 COG6Q9Y2V7 657 aa5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CPSF1Q10570 1443 aaKnown RBP5.51□□□□□ -1.53
PTPRD-203ENST00000381196 CAPN2P17655 700 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 YY1P25490 414 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 TNNC1P63316 161 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 ALS2CLQ60I27 953 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 PDILTQ8N807 584 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 LRRC59Q96AG4 307 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 EHMT1Q9H9B1 1298 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 PPCSQ9HAB8 311 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 MAP2P11137 1827 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 RARSP54136 660 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 HOXB7P09629 217 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 ATP2B1P20020 1258 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 GLE1Q53GS7 698 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 TEX9Q8N6V9 391 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 FBXO41Q8TF61 875 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 CEP63Q96MT8 703 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 HACD3Q9P035 362 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 TRMT112Q9UI30 125 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 TAOK1Q7L7X3 1001 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 OTUD6BQ8N6M0 293 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 PPFIBP2Q8ND30 876 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 WHAMMQ8TF30 809 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC85AQ96PX6 553 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 NUP58Q9BVL2 599 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 VEZTQ9HBM0 779 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 MAP3K15Q6ZN16 1313 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 KNDC1Q76NI1 1749 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 TARSL2A2RTX5 802 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 SATB1Q01826 763 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 BICDL2A1A5D9 508 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 LMNB1P20700 586 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 METTL24Q5JXM2 366 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 RCSD1Q6JBY9 416 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 CUL5Q93034 780 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms