RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 DRC7Q8IY82 874 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 ZNF34Q8IZ26 560 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 CHMP4CQ96CF2 233 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 SENP2Q9HC62 589 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 INCENPQ9NQS7 918 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 C4AP0C0L4 1744 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 C4BP0C0L5 1744 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 ATRNO75882 1429 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 KDM4FA0A1W2PPD8 638 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 KIF28PB7ZC32 967 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 DHX16O60231 1041 aaKnown RBP23.41■■□□□ 1.34
EBF1-202ENST00000380654 ARID4AP29374 1257 aaPredicted RBP23.41■■□□□ 1.34
EBF1-202ENST00000380654 IQCB1Q15051 598 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 FAM13BQ9NYF5 915 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 RTEL1Q9NZ71 1219 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 A0A1B0GVL5 298 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 TCRBV5S4A2TA0A5A2 114 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 ERVV-1B6SEH8 477 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 UBE3CQ15386 1083 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 AIFM3Q96NN9 605 aa23.41■■□□□ 1.34
EBF1-202ENST00000380654 COL14A1Q05707 1796 aaKnown RBP23.4■■□□□ 1.34
EBF1-202ENST00000380654 LRMPQ12912 555 aa23.4■■□□□ 1.34
EBF1-202ENST00000380654 TRDNQ13061 729 aa23.4■■□□□ 1.34
EBF1-202ENST00000380654 PUM3Q15397 648 aaKnown RBP23.4■■□□□ 1.34
EBF1-202ENST00000380654 LINC00301Q8NCQ3 95 aa23.4■■□□□ 1.34
EBF1-202ENST00000380654 B4E1Z4 1266 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 CTAGE5O15320 804 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 TPM3P06753 285 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 FGFR2P21802 821 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 SUSD4Q5VX71 490 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 SEC31BQ9NQW1 1179 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.34
EBF1-202ENST00000380654 LPIN2Q92539 896 aa23.39■■□□□ 1.33
EBF1-202ENST00000380654 FBXW7Q969H0 707 aa23.39■■□□□ 1.33
EBF1-202ENST00000380654 ANGEL1Q9UNK9 670 aaKnown RBP23.39■■□□□ 1.33
EBF1-202ENST00000380654 STX1AQ16623 288 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 FMR1NBQ8N0W7 255 aaPredicted RBP23.38■■□□□ 1.33
EBF1-202ENST00000380654 MRPS27Q92552 414 aaKnown RBP23.38■■□□□ 1.33
EBF1-202ENST00000380654 NEDD4P46934 1319 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 NDUFA8P51970 172 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 STK38Q15208 465 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 MYSM1Q5VVJ2 828 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 CCDC144CPQ8IYA2 1237 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 WDR19Q8NEZ3 1342 aa23.38■■□□□ 1.33
EBF1-202ENST00000380654 ADALQ6DHV7 355 aa23.37■■□□□ 1.33
EBF1-202ENST00000380654 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
EBF1-202ENST00000380654 STRBPQ96SI9 672 aaKnown RBP23.37■■□□□ 1.33
EBF1-202ENST00000380654 LRP5O75197 1615 aa23.37■■□□□ 1.33
EBF1-202ENST00000380654 SH2B2O14492 632 aaPredicted RBP23.37■■□□□ 1.33
EBF1-202ENST00000380654 RASGRF1Q13972 1273 aa23.37■■□□□ 1.33
EBF1-202ENST00000380654 SPATA5Q8NB90 893 aa23.37■■□□□ 1.33
EBF1-202ENST00000380654 UQCRFS1P1P0C7P4 283 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 CDC27P30260 824 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 SF3A1Q15459 793 aaKnown RBP23.36■■□□□ 1.33
EBF1-202ENST00000380654 INTS5Q6P9B9 1019 aaKnown RBP23.36■■□□□ 1.33
EBF1-202ENST00000380654 MAGEB6Q8N7X4 407 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 EPB41L4AQ9HCS5 686 aaPredicted RBP23.36■■□□□ 1.33
EBF1-202ENST00000380654 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
EBF1-202ENST00000380654 GOLGA6L19H0YKK7 550 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 DYNC1I1O14576 645 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 METAP2P50579 478 aaKnown RBP eCLIP23.36■■□□□ 1.33
EBF1-202ENST00000380654 EIF5P55010 431 aaKnown RBP23.36■■□□□ 1.33
EBF1-202ENST00000380654 KIF23Q02241 960 aaPredicted RBP23.36■■□□□ 1.33
EBF1-202ENST00000380654 MICU3Q86XE3 530 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 MYRIPQ8NFW9 859 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 PHKBQ93100 1093 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 CLIP2Q9UDT6 1046 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 ZMYM6O95789 1325 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 PLCH1Q4KWH8 1693 aa23.36■■□□□ 1.33
EBF1-202ENST00000380654 CAVIN2O95810 425 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 CCDC144BQ3MJ40 725 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 APOA5Q6Q788 366 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 TSC1Q92574 1164 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 MYL10Q9BUA6 226 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 POLR3EQ9NVU0 708 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 ARAP2Q8WZ64 1704 aa23.35■■□□□ 1.33
EBF1-202ENST00000380654 DHX40Q8IX18 779 aaKnown RBP23.34■■□□□ 1.33
EBF1-202ENST00000380654 TACC3Q9Y6A5 838 aa23.34■■□□□ 1.33
EBF1-202ENST00000380654 SPTLC2O15270 562 aa23.34■■□□□ 1.33
EBF1-202ENST00000380654 MBD4O95243 580 aa23.34■■□□□ 1.33
EBF1-202ENST00000380654 CTDSPL2Q05D32 466 aa23.34■■□□□ 1.33
EBF1-202ENST00000380654 SDF4Q9BRK5 362 aa23.34■■□□□ 1.33
EBF1-202ENST00000380654 ARMT1Q9H993 441 aa23.34■■□□□ 1.33
EBF1-202ENST00000380654 SLC5A1P13866 664 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 BRAPQ7Z569 592 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.33■■□□□ 1.33
EBF1-202ENST00000380654 MPHOSPH8Q99549 860 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 ALG1Q9BT22 464 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 A0A1W2PQ27 194 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 A0A1W2PQ64 194 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 A0A1W2PQD8 194 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 UBE2Q2LH0YL09 131 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 CRKLP46109 303 aaKnown RBP23.33■■□□□ 1.33
EBF1-202ENST00000380654 KCNG4Q8TDN1 519 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 IGDCC4Q8TDY8 1250 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
EBF1-202ENST00000380654 WNK3Q9BYP7 1800 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 YEATS4O95619 227 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms