RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RGS22Q8NE09 1264 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 CNNM1Q9NRU3 951 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 SKILP12757 684 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 MCAMP43121 646 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 FILIP1Q7Z7B0 1213 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 CDHR2Q9BYE9 1310 aa18.97■□□□□ 0.63
VPS16-203ENST00000380469 ANKRD18BA2A2Z9 1011 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 ITGA6P23229 1130 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 ADD2P35612 726 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 PPP4R3BQ5MIZ7 849 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 SLC9C2Q5TAH2 1124 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 ANO1Q5XXA6 986 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 ANKRD7Q92527 254 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 ZNF512BQ96KM6 892 aaPredicted RBP18.96■□□□□ 0.63
VPS16-203ENST00000380469 BPIFA3Q9BQP9 254 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 MAP3K15Q6ZN16 1313 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 CCDC69A6NI79 296 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
VPS16-203ENST00000380469 GSDMDP57764 484 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 CEP135Q66GS9 1140 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 GIGYF2Q6Y7W6 1299 aaKnown RBP18.96■□□□□ 0.63
VPS16-203ENST00000380469 CCDC112Q8NEF3 446 aa18.96■□□□□ 0.63
VPS16-203ENST00000380469 ANGEL1Q9UNK9 670 aaKnown RBP18.96■□□□□ 0.63
VPS16-203ENST00000380469 CDKL5O76039 1030 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 APPP05067 770 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 TPM4P67936 248 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 KIF23Q02241 960 aaPredicted RBP18.95■□□□□ 0.62
VPS16-203ENST00000380469 ARID5BQ14865 1188 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 TTLL11Q8NHH1 800 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 ZMYM6O95789 1325 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 RIC1Q4ADV7 1423 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 MYH7P12883 1935 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 ZNF202O95125 648 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 CMA1P23946 247 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 SYCP1Q15431 976 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
VPS16-203ENST00000380469 GREM2Q9H772 168 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
VPS16-203ENST00000380469 KIF28PB7ZC32 967 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 GPTP24298 496 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 METAP2P50579 478 aaKnown RBP eCLIP18.94■□□□□ 0.62
VPS16-203ENST00000380469 SMAP1Q8IYB5 467 aaPredicted RBP18.94■□□□□ 0.62
VPS16-203ENST00000380469 SYNE4Q8N205 404 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 GJB4Q9NTQ9 266 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 IMPACTQ9P2X3 320 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 CTSWP56202 376 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 NLRP12P59046 1061 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 UBE3CQ15386 1083 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 NLRP10Q86W26 655 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
VPS16-203ENST00000380469 IDH1O75874 414 aaKnown RBP18.93■□□□□ 0.62
VPS16-203ENST00000380469 PTPN14Q15678 1187 aa18.93■□□□□ 0.62
VPS16-203ENST00000380469 DPCR1Q3MIW9 517 aa18.93■□□□□ 0.62
VPS16-203ENST00000380469 PIGBQ92521 554 aa18.93■□□□□ 0.62
VPS16-203ENST00000380469 ZNF592Q92610 1267 aa18.93■□□□□ 0.62
VPS16-203ENST00000380469 ALG1Q9BT22 464 aa18.93■□□□□ 0.62
VPS16-203ENST00000380469 SHANK3Q9BYB0 1731 aa18.93■□□□□ 0.62
VPS16-203ENST00000380469 GNL2Q13823 731 aaKnown RBP18.92■□□□□ 0.62
VPS16-203ENST00000380469 SLC39A14Q15043 492 aa18.92■□□□□ 0.62
VPS16-203ENST00000380469 HLFQ16534 295 aa18.92■□□□□ 0.62
VPS16-203ENST00000380469 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
VPS16-203ENST00000380469 SH2B2O14492 632 aaPredicted RBP18.92■□□□□ 0.62
VPS16-203ENST00000380469 PFKFB1P16118 471 aa18.92■□□□□ 0.62
VPS16-203ENST00000380469 CCZ1BP86790 482 aa18.92■□□□□ 0.62
VPS16-203ENST00000380469 CCZ1P86791 482 aaPredicted RBP18.92■□□□□ 0.62
VPS16-203ENST00000380469 AXDND1Q5T1B0 1012 aaPredicted RBP18.92■□□□□ 0.62
VPS16-203ENST00000380469 NBPF3Q9H094 633 aa18.92■□□□□ 0.62
VPS16-203ENST00000380469 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
VPS16-203ENST00000380469 CYB5R4Q7L1T6 521 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 JMYQ8N9B5 988 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
VPS16-203ENST00000380469 PIH1D3Q9NQM4 214 aaKnown RBP18.91■□□□□ 0.62
VPS16-203ENST00000380469 ATRNO75882 1429 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 DDX60Q8IY21 1712 aaKnown RBP18.91■□□□□ 0.62
VPS16-203ENST00000380469 PDE8BO95263 885 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 SMC2O95347 1197 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 DHX8Q14562 1220 aaKnown RBP18.91■□□□□ 0.62
VPS16-203ENST00000380469 TMEM87BQ96K49 555 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
VPS16-203ENST00000380469 ZNF532Q9HCE3 1301 aa18.91■□□□□ 0.62
VPS16-203ENST00000380469 BIN1O00499 593 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 NCBP1Q09161 790 aaKnown RBP18.9■□□□□ 0.62
VPS16-203ENST00000380469 TIGD1Q96MW7 591 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 USP27XA6NNY8 438 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 MARCKSP29966 332 aaPredicted RBP18.9■□□□□ 0.62
VPS16-203ENST00000380469 TRIM29Q14134 588 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 KRT40Q6A162 431 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 NFXL1Q6ZNB6 911 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 NBPF11Q86T75 865 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 VGLL2Q8N8G2 317 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 KCND1Q9NSA2 647 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 IFNKQ9P0W0 207 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 C4AP0C0L4 1744 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 C4BP0C0L5 1744 aa18.9■□□□□ 0.62
VPS16-203ENST00000380469 AKAP11Q9UKA4 1901 aa18.89■□□□□ 0.62
VPS16-203ENST00000380469 TOGARAM1Q9Y4F4 1720 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 B4E1Z4 1266 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 ZBTB43O43298 467 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms