RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 PODXL2Q9NZ53 605 aa11.04□□□□□ -0.64
PMS2-202ENST00000380416 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
PMS2-202ENST00000380416 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
PMS2-202ENST00000380416 XDHP47989 1333 aa11.04□□□□□ -0.64
PMS2-202ENST00000380416 G3V3G9 751 aa11.03□□□□□ -0.64
PMS2-202ENST00000380416 ECE2O60344 883 aa11.03□□□□□ -0.64
PMS2-202ENST00000380416 ZC3H12CQ9C0D7 883 aaKnown RBP11.03□□□□□ -0.64
PMS2-202ENST00000380416 SRCIN1Q9C0H9 1055 aa11.03□□□□□ -0.64
PMS2-202ENST00000380416 DBNDD1Q9H9R9 158 aa11.03□□□□□ -0.64
PMS2-202ENST00000380416 ARIH1Q9Y4X5 557 aaPredicted RBP11.03□□□□□ -0.64
PMS2-202ENST00000380416 PSME4Q14997 1843 aa11.02□□□□□ -0.64
PMS2-202ENST00000380416 GRM8O00222 908 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 PSMD14O00487 310 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 ST18O60284 1047 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 ALDH1L1O75891 902 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 ITGA6P23229 1130 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 ATP2B4P23634 1241 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
PMS2-202ENST00000380416 CASP7P55210 303 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 KIF4BQ2VIQ3 1234 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 GPR153Q6NV75 609 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 MOB2Q70IA6 237 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
PMS2-202ENST00000380416 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 MPHOSPH8Q99549 860 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
PMS2-202ENST00000380416 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
PMS2-202ENST00000380416 C9orf78Q9NZ63 289 aaPredicted RBP11.02□□□□□ -0.65
PMS2-202ENST00000380416 CHMP3Q9Y3E7 222 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.65
PMS2-202ENST00000380416 PTPRCP08575 1304 aa11.02□□□□□ -0.65
PMS2-202ENST00000380416 SCN9AQ15858 1988 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 CAMK2BQ13554 666 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
PMS2-202ENST00000380416 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 ERO1AQ96HE7 468 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
PMS2-202ENST00000380416 A0A1B0GUL6 1792 aa11□□□□□ -0.65
PMS2-202ENST00000380416 ZNF646O15015 1829 aaPredicted RBP11□□□□□ -0.65
PMS2-202ENST00000380416 CSF1RP07333 972 aa11□□□□□ -0.65
PMS2-202ENST00000380416 CT47B1P0C2W7 299 aaPredicted RBP11□□□□□ -0.65
PMS2-202ENST00000380416 IFIT5Q13325 482 aaKnown RBP11□□□□□ -0.65
PMS2-202ENST00000380416 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
PMS2-202ENST00000380416 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
PMS2-202ENST00000380416 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
PMS2-202ENST00000380416 ANKRD2Q9GZV1 360 aa11□□□□□ -0.65
PMS2-202ENST00000380416 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
PMS2-202ENST00000380416 MED23Q9ULK4 1368 aa11□□□□□ -0.65
PMS2-202ENST00000380416 UBE2Q2LH0YL09 131 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 KCNJ4P48050 445 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
PMS2-202ENST00000380416 CAP1Q01518 475 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 MUC3AQ02505 3323 aa10.99□□□□□ -0.65
PMS2-202ENST00000380416 FOXO4P98177 505 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 CCDC57Q2TAC2 916 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 ANGEL2Q5VTE6 544 aaKnown RBP10.98□□□□□ -0.65
PMS2-202ENST00000380416 LMBR1LQ6UX01 489 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 TRMT2AQ8IZ69 625 aaKnown RBP10.98□□□□□ -0.65
PMS2-202ENST00000380416 DEFB123Q8N688 67 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 DPF3Q92784 378 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 DDX27Q96GQ7 796 aaKnown RBP10.98□□□□□ -0.65
PMS2-202ENST00000380416 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 GPHNQ9NQX3 736 aaPredicted RBP10.98□□□□□ -0.65
PMS2-202ENST00000380416 LEMD3Q9Y2U8 911 aa10.98□□□□□ -0.65
PMS2-202ENST00000380416 COL9A1P20849 921 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 CHRNDQ07001 517 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 SLC9C1Q4G0N8 1177 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 SUCLG2Q96I99 432 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 ZNF804BA4D1E1 1349 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 EYSQ5T1H1 3165 aa10.97□□□□□ -0.65
PMS2-202ENST00000380416 UTYO14607 1347 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
PMS2-202ENST00000380416 ZBTB7BO15156 539 aaPredicted RBP10.96□□□□□ -0.65
PMS2-202ENST00000380416 EPHA10Q5JZY3 1008 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 Q7L0L9 218 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 PODNQ7Z5L7 613 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 UBE2Q1Q7Z7E8 422 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 COA1Q9GZY4 146 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 KCNQ5Q9NR82 932 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
PMS2-202ENST00000380416 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
PMS2-202ENST00000380416 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
PMS2-202ENST00000380416 IGF2BP3O00425 579 aaKnown RBP eCLIP10.95□□□□□ -0.66
PMS2-202ENST00000380416 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
PMS2-202ENST00000380416 NBPF7P0C2Y1 421 aaPredicted RBP10.95□□□□□ -0.66
PMS2-202ENST00000380416 PLA2G5P39877 138 aa10.95□□□□□ -0.66
PMS2-202ENST00000380416 HNRNPUQ00839 825 aaKnown RBP eCLIP10.95□□□□□ -0.66
PMS2-202ENST00000380416 SCARF1Q14162 830 aa10.95□□□□□ -0.66
PMS2-202ENST00000380416 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms