RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ANKIB1Q9P2G1 1089 aa23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 CCDC88AQ3V6T2 1871 aa23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 MB21D2Q8IYB1 491 aaPredicted RBP23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 LCORLQ8N3X6 602 aa23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 MIGA1Q8NAN2 632 aa23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 FBXL16Q8N461 479 aa23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 EPB41L4AQ9HCS5 686 aaPredicted RBP23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 PNPLA7Q6ZV29 1317 aa23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 IRS2Q9Y4H2 1338 aa23.47■■□□□ 1.35
PDLIM5-205ENST00000380180 GSG1L2A8MUP6 293 aa23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 PFKFB2O60825 505 aa23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 MCM5P33992 734 aa23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 SCRN1Q12765 414 aa23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 FOXD4L6Q3SYB3 417 aaPredicted RBP23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 LARP1BQ659C4 914 aaKnown RBP23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 FOXD4L3Q6VB84 417 aaPredicted RBP23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 RALYLQ86SE5 291 aaKnown RBP23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 ADGRA1Q86SQ6 560 aa23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 COL23A1Q86Y22 540 aaPredicted RBP23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 DDX49Q9Y6V7 483 aaKnown RBP23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 ZMYM6O95789 1325 aa23.46■■□□□ 1.35
PDLIM5-205ENST00000380180 PRKAB2O43741 272 aa23.45■■□□□ 1.35
PDLIM5-205ENST00000380180 GNAT2P19087 354 aa23.45■■□□□ 1.35
PDLIM5-205ENST00000380180 MTMR6Q9Y217 621 aa23.45■■□□□ 1.35
PDLIM5-205ENST00000380180 LEMD3Q9Y2U8 911 aa23.45■■□□□ 1.35
PDLIM5-205ENST00000380180 F13A1P00488 732 aa23.45■■□□□ 1.34
PDLIM5-205ENST00000380180 TBC1D10CQ8IV04 446 aa23.45■■□□□ 1.34
PDLIM5-205ENST00000380180 RBM17Q96I25 401 aaKnown RBP23.45■■□□□ 1.34
PDLIM5-205ENST00000380180 NAPBQ9H115 298 aa23.45■■□□□ 1.34
PDLIM5-205ENST00000380180 SLC4A4Q9Y6R1 1079 aa23.45■■□□□ 1.34
PDLIM5-205ENST00000380180 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
PDLIM5-205ENST00000380180 PRC1O43663 620 aa23.44■■□□□ 1.34
PDLIM5-205ENST00000380180 PDS5AQ29RF7 1337 aaKnown RBP23.44■■□□□ 1.34
PDLIM5-205ENST00000380180 KLHL40Q2TBA0 621 aa23.44■■□□□ 1.34
PDLIM5-205ENST00000380180 ANKRD31Q8N7Z5 1873 aa23.44■■□□□ 1.34
PDLIM5-205ENST00000380180 XDHP47989 1333 aa23.44■■□□□ 1.34
PDLIM5-205ENST00000380180 ANTXR2P58335 489 aa23.43■■□□□ 1.34
PDLIM5-205ENST00000380180 TRDNQ13061 729 aa23.43■■□□□ 1.34
PDLIM5-205ENST00000380180 ZNF274Q96GC6 653 aaPredicted RBP23.43■■□□□ 1.34
PDLIM5-205ENST00000380180 GPHNQ9NQX3 736 aaPredicted RBP23.43■■□□□ 1.34
PDLIM5-205ENST00000380180 PDCP20941 246 aa23.43■■□□□ 1.34
PDLIM5-205ENST00000380180 MAGEB6P1A0A0J9YX57 407 aa23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 JAK2O60674 1132 aa23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 PDIA4P13667 645 aaKnown RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 PDIA3P30101 505 aaKnown RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 EVCP57679 992 aa23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 NLGN1Q8N2Q7 840 aa23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 ZNF384Q8TF68 577 aa23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 RGS17Q9UGC6 210 aaPredicted RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 BAZ2AQ9UIF9 1905 aaKnown RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 VPS37CA5D8V6 355 aaPredicted RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 HOXA10P31260 410 aaPredicted RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 NACAP1Q9BZK3 213 aa23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 NAP1L2Q9ULW6 460 aaPredicted RBP23.42■■□□□ 1.34
PDLIM5-205ENST00000380180 WDR19Q8NEZ3 1342 aa23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 KLRG2A4D1S0 409 aaPredicted RBP23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 CCT2P78371 535 aaKnown RBP23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 CHAF1AQ13111 956 aaPredicted RBP23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 NAA16Q6N069 864 aaPredicted RBP23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 NKX2-3Q8TAU0 364 aa23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 LLPHQ9BRT6 129 aaKnown RBP23.41■■□□□ 1.34
PDLIM5-205ENST00000380180 GPSM2P81274 684 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 NRXN2Q9P2S2 1712 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 ZBTB22O15209 634 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 BBOX1O75936 387 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 TDO2P48775 406 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 CTDSPL2Q05D32 466 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 SMARCC2Q8TAQ2 1214 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 NSUN4Q96CB9 384 aaKnown RBP23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 INCENPQ9NQS7 918 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 NSFL1CQ9UNZ2 370 aaKnown RBP23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 ATP6V1DQ9Y5K8 247 aa23.4■■□□□ 1.34
PDLIM5-205ENST00000380180 CYB5R4Q7L1T6 521 aa23.39■■□□□ 1.34
PDLIM5-205ENST00000380180 FLAD1Q8NFF5 587 aa23.39■■□□□ 1.34
PDLIM5-205ENST00000380180 CRAMP1Q96RY5 1269 aa23.39■■□□□ 1.34
PDLIM5-205ENST00000380180 B4E1Z4 1266 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 CTDNEP1O95476 244 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 NCLP19338 710 aaKnown RBP23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 MECOMQ03112 1051 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 SDR42E1Q8WUS8 393 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 NCOA5Q9HCD5 579 aaKnown RBP23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 BRPF3Q9ULD4 1205 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 RGPD3A6NKT7 1758 aaPredicted RBP23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 RGPD4Q7Z3J3 1758 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 TIAM2Q8IVF5 1701 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 NEDD4P46934 1319 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 DYNLL1P63167 89 aaKnown RBP23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 CDC37L1Q7L3B6 337 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 NSUN7Q8NE18 718 aaKnown RBP23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 GPT2Q8TD30 523 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 DDX11Q96FC9 970 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 GPR101Q96P66 508 aaPredicted RBP23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 GDPD2Q9HCC8 539 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 JAG2Q9Y219 1238 aa23.38■■□□□ 1.33
PDLIM5-205ENST00000380180 MAST2Q6P0Q8 1798 aa23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 PRDX5P30044 214 aa23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 POTEAQ6S8J7 498 aa23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 C15orf52Q6ZUT6 534 aaKnown RBP23.37■■□□□ 1.33
PDLIM5-205ENST00000380180 TACC3Q9Y6A5 838 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms