RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 B4GALNT4Q76KP1 1039 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 CCDC85AQ96PX6 553 aaPredicted RBP13.35□□□□□ -0.27
NPHS1-202ENST00000378910 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
NPHS1-202ENST00000378910 KDM5AP29375 1690 aaKnown RBP13.35□□□□□ -0.27
NPHS1-202ENST00000378910 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 APOBRQ0VD83 1088 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 ME3Q16798 604 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 MCMDC2Q4G0Z9 681 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 MIEF2Q96C03 454 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
NPHS1-202ENST00000378910 UBAC1Q9BSL1 405 aa13.35□□□□□ -0.27
NPHS1-202ENST00000378910 SLC27A2O14975 620 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 DESP17661 470 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
NPHS1-202ENST00000378910 PRPHP41219 470 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
NPHS1-202ENST00000378910 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 MTA1Q13330 715 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 SETDB1Q15047 1291 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 KIF9Q9HAQ2 790 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 ADAM21Q9UKJ8 722 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 ARHGAP25P42331 645 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 SDCCAG8Q86SQ7 713 aaPredicted RBP13.34□□□□□ -0.27
NPHS1-202ENST00000378910 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 AMOTL1Q8IY63 956 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
NPHS1-202ENST00000378910 A0A087WZG4 1122 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 SPA17Q15506 151 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 TM6SF1Q9BZW5 370 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 LZTFL1Q9NQ48 299 aa13.34□□□□□ -0.27
NPHS1-202ENST00000378910 GOLGA8AA7E2F4 631 aa13.33□□□□□ -0.27
NPHS1-202ENST00000378910 NR1I2O75469 434 aa13.33□□□□□ -0.27
NPHS1-202ENST00000378910 ALDH1L1O75891 902 aa13.33□□□□□ -0.27
NPHS1-202ENST00000378910 SH3BGRP55822 239 aaPredicted RBP13.33□□□□□ -0.27
NPHS1-202ENST00000378910 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.27
NPHS1-202ENST00000378910 YIPF3Q9GZM5 350 aa13.33□□□□□ -0.27
NPHS1-202ENST00000378910 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.27
NPHS1-202ENST00000378910 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 GIGYF2Q6Y7W6 1299 aaKnown RBP13.33□□□□□ -0.28
NPHS1-202ENST00000378910 TRIM42Q8IWZ5 723 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 RMDN2Q96LZ7 410 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPHS1-202ENST00000378910 GRM8O00222 908 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 N4BP3O15049 544 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 MYL5Q02045 173 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 CEP128Q6ZU80 1094 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 HDXQ7Z353 690 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 LRRC8AQ8IWT6 810 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 DDX12PQ92771 950 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 BICD1Q96G01 975 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
NPHS1-202ENST00000378910 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
NPHS1-202ENST00000378910 RHOXF2BP0C7M4 288 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.28
NPHS1-202ENST00000378910 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 TBC1D31Q96DN5 1066 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 RHOXF2Q9BQY4 288 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
NPHS1-202ENST00000378910 CREB3O43889 395 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 SLC8A1P32418 973 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 E2F5Q15329 346 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 CHST3Q7LGC8 479 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
NPHS1-202ENST00000378910 UBAP1Q9NZ09 502 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 LCMT1Q9UIC8 334 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 CTAGE9A4FU28 777 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 JAK2O60674 1132 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPHS1-202ENST00000378910 SEPT7Q16181 437 aaKnown RBP13.32□□□□□ -0.28
NPHS1-202ENST00000378910 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 BAG1Q99933 345 aaPredicted RBP13.32□□□□□ -0.28
NPHS1-202ENST00000378910 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 TMEM165Q9HC07 324 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 ZCCHC17Q9NP64 241 aaKnown RBP13.32□□□□□ -0.28
NPHS1-202ENST00000378910 NPATQ14207 1427 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 ATP8B1O43520 1251 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 ATP2C2O75185 946 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 ECEL1O95672 775 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 CLCN6P51797 869 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 FANCCQ00597 558 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 MSL1Q68DK7 614 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 NCOA7Q8NI08 942 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 TSC22D3Q99576 134 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
NPHS1-202ENST00000378910 CABP4P57796 275 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 CCDC121Q6ZUS5 278 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms