RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 GPT2Q8TD30 523 aa22.96■■□□□ 1.27
SSU72-204ENST00000378726 POTEAQ6S8J7 498 aa22.96■■□□□ 1.27
SSU72-204ENST00000378726 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
SSU72-204ENST00000378726 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
SSU72-204ENST00000378726 RBM27Q9P2N5 1060 aaKnown RBP22.96■■□□□ 1.27
SSU72-204ENST00000378726 PATL2C9JE40 543 aaKnown RBP22.95■■□□□ 1.26
SSU72-204ENST00000378726 MBD4O95243 580 aa22.95■■□□□ 1.26
SSU72-204ENST00000378726 RBM17Q96I25 401 aaKnown RBP22.95■■□□□ 1.26
SSU72-204ENST00000378726 RBSNQ9H1K0 784 aa22.95■■□□□ 1.26
SSU72-204ENST00000378726 RAI14Q9P0K7 980 aa22.95■■□□□ 1.26
SSU72-204ENST00000378726 SEMA3EO15041 775 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 BRF1Q92994 677 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 ARMT1Q9H993 441 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 A0A1B0GUL6 1792 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 DTNBO60941 627 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 GJB2P29033 226 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 STK3Q13188 491 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 TXNRD3Q86VQ6 643 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 LEMD3Q9Y2U8 911 aa22.94■■□□□ 1.26
SSU72-204ENST00000378726 CYP7A1P22680 504 aa22.93■■□□□ 1.26
SSU72-204ENST00000378726 SLC51AQ86UW1 340 aa22.93■■□□□ 1.26
SSU72-204ENST00000378726 FLAD1Q8NFF5 587 aa22.93■■□□□ 1.26
SSU72-204ENST00000378726 WDR33Q9C0J8 1336 aaKnown RBP22.93■■□□□ 1.26
SSU72-204ENST00000378726 CHST3Q7LGC8 479 aa22.93■■□□□ 1.26
SSU72-204ENST00000378726 SYT1P21579 422 aa22.92■■□□□ 1.26
SSU72-204ENST00000378726 ALX1Q15699 326 aa22.92■■□□□ 1.26
SSU72-204ENST00000378726 ZSCAN30Q86W11 494 aa22.92■■□□□ 1.26
SSU72-204ENST00000378726 IFNL3Q8IZI9 196 aa22.92■■□□□ 1.26
SSU72-204ENST00000378726 MIGA1Q8NAN2 632 aa22.92■■□□□ 1.26
SSU72-204ENST00000378726 COL1A1P02452 1464 aaPredicted RBP22.91■■□□□ 1.26
SSU72-204ENST00000378726 XDHP47989 1333 aa22.91■■□□□ 1.26
SSU72-204ENST00000378726 BBOX1O75936 387 aa22.91■■□□□ 1.26
SSU72-204ENST00000378726 LCORLQ8N3X6 602 aa22.91■■□□□ 1.26
SSU72-204ENST00000378726 AGXT2Q9BYV1 514 aa22.91■■□□□ 1.26
SSU72-204ENST00000378726 DOCK2Q92608 1830 aa22.91■■□□□ 1.26
SSU72-204ENST00000378726 IRS2Q9Y4H2 1338 aa22.91■■□□□ 1.26
SSU72-204ENST00000378726 KLRG2A4D1S0 409 aaPredicted RBP22.9■■□□□ 1.26
SSU72-204ENST00000378726 HOXA10P31260 410 aaPredicted RBP22.9■■□□□ 1.26
SSU72-204ENST00000378726 NCOA7Q8NI08 942 aa22.9■■□□□ 1.26
SSU72-204ENST00000378726 GSG1L2A8MUP6 293 aa22.9■■□□□ 1.26
SSU72-204ENST00000378726 STX6O43752 255 aa22.9■■□□□ 1.26
SSU72-204ENST00000378726 GNAT2P19087 354 aa22.9■■□□□ 1.26
SSU72-204ENST00000378726 NSFL1CQ9UNZ2 370 aaKnown RBP22.9■■□□□ 1.26
SSU72-204ENST00000378726 PNPLA7Q6ZV29 1317 aa22.89■■□□□ 1.26
SSU72-204ENST00000378726 PRKAB2O43741 272 aa22.89■■□□□ 1.26
SSU72-204ENST00000378726 APOBRQ0VD83 1088 aa22.89■■□□□ 1.26
SSU72-204ENST00000378726 ADGRA1Q86SQ6 560 aa22.89■■□□□ 1.26
SSU72-204ENST00000378726 NAPBQ9H115 298 aa22.89■■□□□ 1.26
SSU72-204ENST00000378726 SLC4A4Q9Y6R1 1079 aa22.89■■□□□ 1.26
SSU72-204ENST00000378726 MCM5P33992 734 aa22.89■■□□□ 1.25
SSU72-204ENST00000378726 GPSM2P81274 684 aa22.89■■□□□ 1.25
SSU72-204ENST00000378726 CHAF1AQ13111 956 aaPredicted RBP22.89■■□□□ 1.25
SSU72-204ENST00000378726 RALYLQ86SE5 291 aaKnown RBP22.89■■□□□ 1.25
SSU72-204ENST00000378726 GTF3C6Q969F1 213 aa22.89■■□□□ 1.25
SSU72-204ENST00000378726 CRAMP1Q96RY5 1269 aa22.89■■□□□ 1.25
SSU72-204ENST00000378726 NBPF3Q9H094 633 aa22.89■■□□□ 1.25
SSU72-204ENST00000378726 PDS5AQ29RF7 1337 aaKnown RBP22.88■■□□□ 1.25
SSU72-204ENST00000378726 RRP9O43818 475 aaKnown RBP22.88■■□□□ 1.25
SSU72-204ENST00000378726 MB21D2Q8IYB1 491 aaPredicted RBP22.88■■□□□ 1.25
SSU72-204ENST00000378726 EPB41L4AQ9HCS5 686 aaPredicted RBP22.88■■□□□ 1.25
SSU72-204ENST00000378726 TMEM63CQ9P1W3 806 aa22.88■■□□□ 1.25
SSU72-204ENST00000378726 TRDNQ13061 729 aa22.88■■□□□ 1.25
SSU72-204ENST00000378726 NAA16Q6N069 864 aaPredicted RBP22.88■■□□□ 1.25
SSU72-204ENST00000378726 FBXL16Q8N461 479 aa22.88■■□□□ 1.25
SSU72-204ENST00000378726 BRIP1Q9BX63 1249 aa22.88■■□□□ 1.25
SSU72-204ENST00000378726 MAGEB6P1A0A0J9YX57 407 aa22.87■■□□□ 1.25
SSU72-204ENST00000378726 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
SSU72-204ENST00000378726 TBC1D10CQ8IV04 446 aa22.87■■□□□ 1.25
SSU72-204ENST00000378726 NACAP1Q9BZK3 213 aa22.87■■□□□ 1.25
SSU72-204ENST00000378726 LAMA4Q16363 1823 aa22.87■■□□□ 1.25
SSU72-204ENST00000378726 PRC1O43663 620 aa22.86■■□□□ 1.25
SSU72-204ENST00000378726 PFKFB2O60825 505 aa22.86■■□□□ 1.25
SSU72-204ENST00000378726 ZMYM6O95789 1325 aa22.86■■□□□ 1.25
SSU72-204ENST00000378726 HSP90AA2PQ14568 343 aaPredicted RBP22.86■■□□□ 1.25
SSU72-204ENST00000378726 LARP1BQ659C4 914 aaKnown RBP22.86■■□□□ 1.25
SSU72-204ENST00000378726 ZNF384Q8TF68 577 aa22.86■■□□□ 1.25
SSU72-204ENST00000378726 ZBTB22O15209 634 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 MMP10P09238 476 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 SCRN1Q12765 414 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 NSUN4Q96CB9 384 aaKnown RBP22.85■■□□□ 1.25
SSU72-204ENST00000378726 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
SSU72-204ENST00000378726 JAG2Q9Y219 1238 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 PARP3Q9Y6F1 533 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 ATP2B4P23634 1241 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 TDO2P48775 406 aa22.85■■□□□ 1.25
SSU72-204ENST00000378726 FOXD4L6Q3SYB3 417 aaPredicted RBP22.85■■□□□ 1.25
SSU72-204ENST00000378726 FOXD4L3Q6VB84 417 aaPredicted RBP22.85■■□□□ 1.25
SSU72-204ENST00000378726 ZNF274Q96GC6 653 aaPredicted RBP22.85■■□□□ 1.25
SSU72-204ENST00000378726 GPHNQ9NQX3 736 aaPredicted RBP22.85■■□□□ 1.25
SSU72-204ENST00000378726 MSNP26038 577 aaKnown RBP22.84■■□□□ 1.25
SSU72-204ENST00000378726 ANTXR2P58335 489 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 MECOMQ03112 1051 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 C15orf52Q6ZUT6 534 aaKnown RBP22.84■■□□□ 1.25
SSU72-204ENST00000378726 TDRD7Q8NHU6 1098 aaKnown RBP22.84■■□□□ 1.25
SSU72-204ENST00000378726 RIOK1Q9BRS2 568 aaKnown RBP22.84■■□□□ 1.25
SSU72-204ENST00000378726 GGA1Q9UJY5 639 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 NAP1L2Q9ULW6 460 aaPredicted RBP22.84■■□□□ 1.25
SSU72-204ENST00000378726 SYCE3A1L190 88 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 UFL1O94874 794 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 PDIA3P30101 505 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms