RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PSMA7O14818 248 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 GNL1P36915 607 aaPredicted RBP18.37■□□□□ 0.53
RGP1-201ENST00000378078 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 PAGR1Q9BTK6 254 aa18.37■□□□□ 0.53
RGP1-201ENST00000378078 SPATA17Q96L03 361 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 TRIM31Q9BZY9 425 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 PRPF31Q8WWY3 499 aaKnown RBP18.36■□□□□ 0.53
RGP1-201ENST00000378078 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
RGP1-201ENST00000378078 GSDMBQ8TAX9 411 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 MSH6P52701 1360 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 CTAGE15A4D2H0 777 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 CTAGE8P0CG41 777 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 HPDP32754 393 aaPredicted RBP18.36■□□□□ 0.53
RGP1-201ENST00000378078 GPR162Q16538 588 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 CTAGE6Q86UF2 777 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 CTAGE4Q8IX94 777 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 B4DLN1 442 aa18.36■□□□□ 0.53
RGP1-201ENST00000378078 MRPL12P52815 198 aaKnown RBP18.36■□□□□ 0.53
RGP1-201ENST00000378078 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 BZW2Q9Y6E2 419 aaKnown RBP18.35■□□□□ 0.53
RGP1-201ENST00000378078 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 TACC1O75410 805 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 ITKQ08881 620 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 STRN3Q13033 797 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 CEP85LQ5SZL2 805 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 CCDC170Q8IYT3 715 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 MEIS3Q99687 375 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 CCDC77Q9BR77 488 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 IGF1RP08069 1367 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 TBC1D31Q96DN5 1066 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 GOLGA6L9A6NEM1 432 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
RGP1-201ENST00000378078 STX10O60499 249 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 TOM1O60784 492 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
RGP1-201ENST00000378078 PTPRCP08575 1304 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 ANKS4BQ8N8V4 417 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 SEPT10Q9P0V9 454 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 RIOK3O14730 519 aaKnown RBP18.34■□□□□ 0.53
RGP1-201ENST00000378078 ATP2A2P16615 1042 aaKnown RBP18.34■□□□□ 0.53
RGP1-201ENST00000378078 ITIH3Q06033 890 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 LRMPQ12912 555 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 PYM1Q9BRP8 204 aaKnown RBP18.34■□□□□ 0.53
RGP1-201ENST00000378078 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 VIMP08670 466 aaKnown RBP18.34■□□□□ 0.53
RGP1-201ENST00000378078 HSPA2P54652 639 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 CCDC110Q8TBZ0 833 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
RGP1-201ENST00000378078 INF2Q27J81 1249 aa18.33■□□□□ 0.53
RGP1-201ENST00000378078 SPOPO43791 374 aa18.33■□□□□ 0.53
RGP1-201ENST00000378078 IRAK4Q9NWZ3 460 aa18.33■□□□□ 0.53
RGP1-201ENST00000378078 PLEKHH1Q9ULM0 1364 aa18.33■□□□□ 0.53
RGP1-201ENST00000378078 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.53
RGP1-201ENST00000378078 ZSCAN22P10073 491 aaPredicted RBP18.33■□□□□ 0.53
RGP1-201ENST00000378078 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.53
RGP1-201ENST00000378078 HS2ST1Q7LGA3 356 aa18.33■□□□□ 0.53
RGP1-201ENST00000378078 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
RGP1-201ENST00000378078 UBE2HP62256 183 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 TPTE2Q6XPS3 522 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 CPLX4Q7Z7G2 160 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 ABCF3Q9NUQ8 709 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 AATFQ9NY61 560 aaKnown RBP eCLIP18.33■□□□□ 0.52
RGP1-201ENST00000378078 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.52
RGP1-201ENST00000378078 SLC8A3P57103 927 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 PTPROQ16827 1216 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 TAB3Q8N5C8 712 aaPredicted RBP18.33■□□□□ 0.52
RGP1-201ENST00000378078 ARHGEF11O15085 1522 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 SYNJ2BP-COX16A0A087WUM0 186 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 DYNC1I1O14576 645 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 RHPN1Q8TCX5 695 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 CTAGE1Q96RT6 745 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 COX16Q9P0S2 106 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 MYO1AQ9UBC5 1043 aa18.33■□□□□ 0.52
RGP1-201ENST00000378078 SARNPP82979 210 aaKnown RBP18.32■□□□□ 0.52
RGP1-201ENST00000378078 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 SKILP12757 684 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 EHBP1Q8NDI1 1231 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 SKA2Q8WVK7 121 aaPredicted RBP18.32■□□□□ 0.52
RGP1-201ENST00000378078 CCDC42Q96M95 316 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 RDH13Q8NBN7 331 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 PSMB7Q99436 277 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 EPB41P11171 864 aaKnown RBP18.32■□□□□ 0.52
RGP1-201ENST00000378078 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 IGSF3O75054 1194 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 CCDC121Q6ZUS5 278 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 DDX12PQ92771 950 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 MAGED2Q9UNF1 606 aaPredicted RBP18.32■□□□□ 0.52
RGP1-201ENST00000378078 SNAPC4Q5SXM2 1469 aa18.32■□□□□ 0.52
RGP1-201ENST00000378078 IGHDP01880 384 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms