RNA–Protein interactions for RNA: ENST00000377883.7

USP30-202, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-202ENST00000377883 IFNL1Q8IU54 200 aa23.42■■□□□ 1.34
USP30-202ENST00000377883 ANKRD13AQ8IZ07 590 aa23.42■■□□□ 1.34
USP30-202ENST00000377883 SSC5DA1L4H1 1573 aa23.42■■□□□ 1.34
USP30-202ENST00000377883 TNNI2P48788 182 aa23.41■■□□□ 1.34
USP30-202ENST00000377883 SOX10P56693 466 aa23.41■■□□□ 1.34
USP30-202ENST00000377883 CHAF1AQ13111 956 aaPredicted RBP23.41■■□□□ 1.34
USP30-202ENST00000377883 VGLL2Q8N8G2 317 aa23.41■■□□□ 1.34
USP30-202ENST00000377883 IQSEC3Q9UPP2 1182 aaPredicted RBP23.41■■□□□ 1.34
USP30-202ENST00000377883 OTUD7BQ6GQQ9 843 aa23.4■■□□□ 1.34
USP30-202ENST00000377883 R3HDMLQ9H3Y0 253 aa23.4■■□□□ 1.34
USP30-202ENST00000377883 IFIT1P09914 478 aaKnown RBP23.39■■□□□ 1.33
USP30-202ENST00000377883 KLHDC4Q8TBB5 520 aa23.39■■□□□ 1.33
USP30-202ENST00000377883 MRIQ9BWK5 157 aa23.39■■□□□ 1.33
USP30-202ENST00000377883 TCP10L2B9ZVM9 353 aa23.38■■□□□ 1.33
USP30-202ENST00000377883 BCAMP50895 628 aa23.38■■□□□ 1.33
USP30-202ENST00000377883 PUM3Q15397 648 aaKnown RBP23.38■■□□□ 1.33
USP30-202ENST00000377883 FBXO46Q6PJ61 603 aaPredicted RBP23.38■■□□□ 1.33
USP30-202ENST00000377883 SMC4Q9NTJ3 1288 aa23.38■■□□□ 1.33
USP30-202ENST00000377883 SUGT1Q9Y2Z0 365 aa23.38■■□□□ 1.33
USP30-202ENST00000377883 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
USP30-202ENST00000377883 KIF16BQ96L93 1317 aa23.37■■□□□ 1.33
USP30-202ENST00000377883 EYA2O00167 538 aa23.37■■□□□ 1.33
USP30-202ENST00000377883 GRIK5Q16478 980 aa23.37■■□□□ 1.33
USP30-202ENST00000377883 TEKT1Q969V4 418 aa23.37■■□□□ 1.33
USP30-202ENST00000377883 CDCA7LQ96GN5 454 aa23.37■■□□□ 1.33
USP30-202ENST00000377883 TEPSINQ96N21 525 aa23.37■■□□□ 1.33
USP30-202ENST00000377883 FGFR2P21802 821 aa23.36■■□□□ 1.33
USP30-202ENST00000377883 IGF2BP3O00425 579 aaKnown RBP eCLIP23.35■■□□□ 1.33
USP30-202ENST00000377883 CT47B1P0C2W7 299 aaPredicted RBP23.35■■□□□ 1.33
USP30-202ENST00000377883 SLC5A1P13866 664 aa23.35■■□□□ 1.33
USP30-202ENST00000377883 GJA5P36382 358 aa23.35■■□□□ 1.33
USP30-202ENST00000377883 RFX5P48382 616 aaPredicted RBP23.35■■□□□ 1.33
USP30-202ENST00000377883 MAP3K9P80192 1104 aa23.35■■□□□ 1.33
USP30-202ENST00000377883 TRMT2AQ8IZ69 625 aaKnown RBP23.35■■□□□ 1.33
USP30-202ENST00000377883 TMEM39BQ9GZU3 492 aa23.35■■□□□ 1.33
USP30-202ENST00000377883 ELP3Q9H9T3 547 aa23.35■■□□□ 1.33
USP30-202ENST00000377883 MAST3O60307 1309 aa23.34■■□□□ 1.33
USP30-202ENST00000377883 TESPA1A2RU30 521 aaPredicted RBP23.34■■□□□ 1.33
USP30-202ENST00000377883 LPIN2Q92539 896 aa23.34■■□□□ 1.33
USP30-202ENST00000377883 ZDHHC15Q96MV8 337 aa23.34■■□□□ 1.33
USP30-202ENST00000377883 TMOD2Q9NZR1 351 aa23.34■■□□□ 1.33
USP30-202ENST00000377883 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
USP30-202ENST00000377883 UBTFL1P0CB47 393 aaPredicted RBP23.33■■□□□ 1.33
USP30-202ENST00000377883 OPTNQ96CV9 577 aa23.33■■□□□ 1.33
USP30-202ENST00000377883 FBXO3Q9UK99 471 aa23.33■■□□□ 1.33
USP30-202ENST00000377883 ARAP2Q8WZ64 1704 aa23.33■■□□□ 1.32
USP30-202ENST00000377883 FKBP1CQ5VVH2 108 aa23.32■■□□□ 1.32
USP30-202ENST00000377883 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.32■■□□□ 1.32
USP30-202ENST00000377883 CDAN1Q8IWY9 1227 aa23.32■■□□□ 1.32
USP30-202ENST00000377883 WDR66Q8TBY9 1149 aa23.32■■□□□ 1.32
USP30-202ENST00000377883 HOOK2Q96ED9 719 aa23.32■■□□□ 1.32
USP30-202ENST00000377883 CSADQ9Y600 493 aa23.32■■□□□ 1.32
USP30-202ENST00000377883 HHIPL2Q6UWX4 724 aa23.31■■□□□ 1.32
USP30-202ENST00000377883 FAM83AQ86UY5 434 aa23.31■■□□□ 1.32
USP30-202ENST00000377883 ERO1AQ96HE7 468 aa23.31■■□□□ 1.32
USP30-202ENST00000377883 API5Q9BZZ5 524 aaKnown RBP23.31■■□□□ 1.32
USP30-202ENST00000377883 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
USP30-202ENST00000377883 CRHR2Q13324 411 aa23.3■■□□□ 1.32
USP30-202ENST00000377883 APOBEC3HQ6NTF7 200 aaKnown RBP23.3■■□□□ 1.32
USP30-202ENST00000377883 ATG9AQ7Z3C6 839 aa23.3■■□□□ 1.32
USP30-202ENST00000377883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.3■■□□□ 1.32
USP30-202ENST00000377883 PTPN18Q99952 460 aa23.3■■□□□ 1.32
USP30-202ENST00000377883 CEP126Q9P2H0 1117 aa23.3■■□□□ 1.32
USP30-202ENST00000377883 TRIM17Q9Y577 477 aa23.3■■□□□ 1.32
USP30-202ENST00000377883 CIAO1O76071 339 aa23.29■■□□□ 1.32
USP30-202ENST00000377883 GTF2A2P52657 109 aa23.29■■□□□ 1.32
USP30-202ENST00000377883 CACNB3P54284 484 aa23.29■■□□□ 1.32
USP30-202ENST00000377883 VGLL4Q14135 290 aa23.29■■□□□ 1.32
USP30-202ENST00000377883 MS4A4AQ96JQ5 239 aa23.29■■□□□ 1.32
USP30-202ENST00000377883 GNL3LQ9NVN8 582 aaKnown RBP23.29■■□□□ 1.32
USP30-202ENST00000377883 OTOP1Q7RTM1 612 aa23.28■■□□□ 1.32
USP30-202ENST00000377883 LAMB1P07942 1786 aa23.27■■□□□ 1.32
USP30-202ENST00000377883 ATP2B3Q16720 1220 aa23.27■■□□□ 1.32
USP30-202ENST00000377883 SIL1Q9H173 461 aa23.27■■□□□ 1.32
USP30-202ENST00000377883 CCL15-CCL14A0A0B4J2E2 113 aa23.26■■□□□ 1.31
USP30-202ENST00000377883 SP3Q02447 781 aa23.26■■□□□ 1.31
USP30-202ENST00000377883 CCL15Q16663 113 aa23.26■■□□□ 1.31
USP30-202ENST00000377883 DCAF15Q66K64 600 aa23.26■■□□□ 1.31
USP30-202ENST00000377883 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
USP30-202ENST00000377883 BRI3BPQ8WY22 251 aa23.26■■□□□ 1.31
USP30-202ENST00000377883 IL15P40933 162 aaPredicted RBP23.25■■□□□ 1.31
USP30-202ENST00000377883 ERO1BQ86YB8 467 aa23.25■■□□□ 1.31
USP30-202ENST00000377883 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
USP30-202ENST00000377883 OTUD5Q96G74 571 aa23.25■■□□□ 1.31
USP30-202ENST00000377883 EFCC1Q9HA90 598 aa23.25■■□□□ 1.31
USP30-202ENST00000377883 ZFYVE28Q9HCC9 887 aa23.25■■□□□ 1.31
USP30-202ENST00000377883 OTOFQ9HC10 1997 aa23.24■■□□□ 1.31
USP30-202ENST00000377883 SPDYE5A6NIY4 337 aa23.24■■□□□ 1.31
USP30-202ENST00000377883 WDHD1O75717 1129 aaPredicted RBP23.24■■□□□ 1.31
USP30-202ENST00000377883 ARHGEF6Q15052 776 aa23.24■■□□□ 1.31
USP30-202ENST00000377883 INTS3Q68E01 1043 aaKnown RBP23.24■■□□□ 1.31
USP30-202ENST00000377883 WRNIP1Q96S55 665 aa23.24■■□□□ 1.31
USP30-202ENST00000377883 LRRFIP2Q9Y608 721 aaKnown RBP23.24■■□□□ 1.31
USP30-202ENST00000377883 SEMA3EO15041 775 aa23.23■■□□□ 1.31
USP30-202ENST00000377883 TAF1CQ15572 869 aaPredicted RBP23.23■■□□□ 1.31
USP30-202ENST00000377883 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
USP30-202ENST00000377883 DENND2AQ9ULE3 1009 aa23.23■■□□□ 1.31
USP30-202ENST00000377883 PTPN22Q9Y2R2 807 aa23.23■■□□□ 1.31
USP30-202ENST00000377883 SLC34A2O95436 690 aa23.22■■□□□ 1.31
USP30-202ENST00000377883 LDHBP07195 334 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms