RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 USP37Q86T82 979 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
HIF3A-205ENST00000377670 KDM5DQ9BY66 1539 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 RXRAP19793 462 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 DBNDD2Q9BQY9 259 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 SCAND2PQ9GZW5 306 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 NPHP4O75161 1426 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 ZNF335Q9H4Z2 1342 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 GOLGA6L10A0A0M3HER8 536 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 VPS36Q86VN1 386 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-205ENST00000377670 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
HIF3A-205ENST00000377670 TAF5LO75529 589 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 CHMLP26374 656 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 FERMT1Q9BQL6 677 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 PAGR1Q9BTK6 254 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SSX2IPQ9Y2D8 614 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 PDIA4P13667 645 aaKnown RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 MCMDC2Q4G0Z9 681 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 KLHL10Q6JEL2 608 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 LRRC27Q9C0I9 530 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 BIN1O00499 593 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 MCM3P25205 808 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 NAPAP54920 295 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 KCNQ4P56696 695 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 RBM6P78332 1123 aaKnown RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SNW1Q13573 536 aaKnown RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 Q6ZUG5 572 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 PSMD1Q99460 953 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SYNCQ9H7C4 482 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 ORC3Q9UBD5 711 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 GNAT2P19087 354 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 UNC5CLQ8IV45 518 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 METTL22Q9BUU2 404 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SLC26A6Q9BXS9 759 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 ZBTB21Q9ULJ3 1066 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 AFF2P51816 1311 aa12.3□□□□□ -0.44
HIF3A-205ENST00000377670 SPA17Q15506 151 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 KLHL40Q2TBA0 621 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 MICALCLQ6ZW33 695 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
HIF3A-205ENST00000377670 FAM107BQ9H098 131 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
HIF3A-205ENST00000377670 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 NEMFO60524 1076 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 CPLX3Q8WVH0 158 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 KIF1BO60333 1816 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
HIF3A-205ENST00000377670 KRT222Q8N1A0 295 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 BIRC2Q13490 618 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 TMTC2Q8N394 836 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 FAM227BQ96M60 508 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 ABCC3O15438 1527 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 LRRC45Q96CN5 670 aa12.29□□□□□ -0.44
HIF3A-205ENST00000377670 PDE8AO60658 829 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 EZRP15311 586 aaKnown RBP12.28□□□□□ -0.44
HIF3A-205ENST00000377670 ITGA6P23229 1130 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 MAGEB6Q8N7X4 407 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 UBA7P41226 1012 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 DNA2P51530 1060 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 GTF2A1P52655 376 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-205ENST00000377670 CTR9Q6PD62 1173 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 CACNA2D4Q7Z3S7 1137 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 PLBD2Q8NHP8 589 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 CTNNA2P26232 953 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
HIF3A-205ENST00000377670 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 PAXBP1Q9Y5B6 917 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 PLEKHG1Q9ULL1 1385 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-205ENST00000377670 AK2P54819 239 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 TCP10Q12799 353 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
HIF3A-205ENST00000377670 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.44
HIF3A-205ENST00000377670 GSDMDP57764 484 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms