RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	RTL9	Q8NET4	1388 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	MED23	Q9ULK4	1368 aa		13.79	□□□□□ -0.2
LMO7-204	ENST00000377499	ZNF213	O14771	459 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	MBD4	O95243	580 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	CYP21A2	P08686	494 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	COL5A3	P25940	1745 aa	Predicted RBP	13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	ADD2	P35612	726 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	SLC51A	Q86UW1	340 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	CCDC94	Q9BW85	323 aa	Predicted RBP	13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	ARMT1	Q9H993	441 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	MYH3	P11055	1940 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	RIMBP2	O15034	1052 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	TDO2	P48775	406 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	TRDN	Q13061	729 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	FAM84B	Q96KN1	310 aa	Predicted RBP	13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	OFD1	O75665	1012 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	LETM1	O95202	739 aa	Predicted RBP	13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	NECAB1	Q8N987	351 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	ZNF526	Q8TF50	670 aa	Predicted RBP	13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	DENND2A	Q9ULE3	1009 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	SMC3	Q9UQE7	1217 aa		13.78	□□□□□ -0.2
LMO7-204	ENST00000377499	POLRMT	O00411	1230 aa	Known RBP	13.77	□□□□□ -0.2
LMO7-204	ENST00000377499	CHRM1	P11229	460 aa	Predicted RBP	13.77	□□□□□ -0.2
LMO7-204	ENST00000377499	TM4SF1	P30408	202 aa		13.77	□□□□□ -0.2
LMO7-204	ENST00000377499	RRP12	Q5JTH9	1297 aa	Known RBP	13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	NAPB	Q9H115	298 aa		13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	TRAK2	O60296	914 aa		13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	IRX5	P78411	483 aa	Predicted RBP	13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	EP400NL	Q6ZTU2	488 aa		13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	DSCC1	Q9BVC3	393 aa		13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	SBF2	Q86WG5	1849 aa		13.77	□□□□□ -0.21
LMO7-204	ENST00000377499	FGA	P02671	866 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	NAA16	Q6N069	864 aa	Predicted RBP	13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	DZIP1	Q86YF9	867 aa	Known RBP	13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	GBP4	Q96PP9	640 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	TRIM34	Q9BYJ4	488 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	GGA1	Q9UJY5	639 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	SLC4A4	Q9Y6R1	1079 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499		A0A0G2JLW4	131 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	TXNRD3	Q86VQ6	643 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	ZSWIM6	Q9HCJ5	1215 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	AKT1S1	Q96B36	256 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	NACAP1	Q9BZK3	213 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	CWC22	Q9HCG8	908 aa	Known RBP	13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	RFX7	Q2KHR2	1363 aa		13.76	□□□□□ -0.21
LMO7-204	ENST00000377499	XDH	P47989	1333 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	MINDY4B	A8MYZ0	360 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	GOLGA6L22	H0YM25	854 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	RPS6KB1	P23443	525 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	NUCB2	P80303	420 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	ANKRD1	Q15327	319 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	UBE3C	Q15386	1083 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499		Q6ZUG5	572 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	SLC15A2	Q16348	729 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	ZNF804A	Q7Z570	1209 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	MTERF4	Q7Z6M4	381 aa	Known RBP	13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	TNPO1	Q92973	898 aa	Known RBP	13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	BRF1	Q92994	677 aa		13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	GTPBP4	Q9BZE4	634 aa	Known RBP	13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.75	□□□□□ -0.21
LMO7-204	ENST00000377499	GPSM2	P81274	684 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	TM6SF1	Q9BZW5	370 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	TAF1	P21675	1872 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	BBOX1	O75936	387 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	PDE6B	P35913	854 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	SLC4A8	Q2Y0W8	1093 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	MAGEB6P1	A0A0J9YX57	407 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499		E7EWF7	191 aa		13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	PPEF1	O14829	653 aa	Predicted RBP	13.74	□□□□□ -0.21
LMO7-204	ENST00000377499	PNPLA7	Q6ZV29	1317 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	FSD2	A1L4K1	749 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	PRKAB2	O43741	272 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	PPFIA3	O75145	1194 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	C2CD5	Q86YS7	1000 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	BRIP1	Q9BX63	1249 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	LEMD3	Q9Y2U8	911 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	PRR29	P0C7W0	189 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	NOL10	Q9BSC4	688 aa	Known RBP	13.73	□□□□□ -0.21
LMO7-204	ENST00000377499		H0YIN7	160 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	FOSB	P53539	338 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	PKP1	Q13835	747 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	COL9A3	Q14050	684 aa	Predicted RBP	13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	OLFM4	Q6UX06	510 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	ZSCAN30	Q86W11	494 aa		13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.73	□□□□□ -0.21
LMO7-204	ENST00000377499	VPS37C	A5D8V6	355 aa	Predicted RBP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	LARGE1	O95461	756 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	HMGB1	P09429	215 aa	Known RBP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	RAB11FIP4	Q86YS3	637 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	LCORL	Q8N3X6	602 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	SDR42E1	Q8WUS8	393 aa		13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	TNNT3	P45378	269 aa	Predicted RBP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	DHX32	Q7L7V1	743 aa	Known RBP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
LMO7-204	ENST00000377499	RREB1	Q92766	1687 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms