RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RAB11FIP4Q86YS3 637 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 IRS2Q9Y4H2 1338 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 UFL1O94874 794 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 GJB2P29033 226 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 CTDSPL2Q05D32 466 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 CTNNA3Q9UI47 895 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 SLC4A4Q9Y6R1 1079 aa14.95□□□□□ -0.02
CLCN6-206ENST00000376496 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 GSG1L2A8MUP6 293 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 EXOSC10Q01780 885 aaKnown RBP14.94□□□□□ -0.02
CLCN6-206ENST00000376496 GRIK5Q16478 980 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 IFNL3Q8IZI9 196 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 FBXO41Q8TF61 875 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 ZSCAN31Q96LW9 406 aaPredicted RBP14.94□□□□□ -0.02
CLCN6-206ENST00000376496 XDHP47989 1333 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 ANKRD31Q8N7Z5 1873 aa14.94□□□□□ -0.02
CLCN6-206ENST00000376496 CAMKK2Q96RR4 588 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 TACC3Q9Y6A5 838 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 JAK2O60674 1132 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 CCT2P78371 535 aaKnown RBP14.93□□□□□ -0.02
CLCN6-206ENST00000376496 SH2B1Q9NRF2 756 aaPredicted RBP14.93□□□□□ -0.02
CLCN6-206ENST00000376496 POLLQ9UGP5 575 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 PARP3Q9Y6F1 533 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 BRD1O95696 1058 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 MECOMQ03112 1051 aa14.93□□□□□ -0.02
CLCN6-206ENST00000376496 NCOA5Q9HCD5 579 aaKnown RBP14.93□□□□□ -0.02
CLCN6-206ENST00000376496 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
CLCN6-206ENST00000376496 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.93□□□□□ -0.02
CLCN6-206ENST00000376496 TRAK2O60296 914 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 SYT1P21579 422 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 DEKP35659 375 aaKnown RBP14.92□□□□□ -0.02
CLCN6-206ENST00000376496 ANTXR2P58335 489 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 ANKRD1Q15327 319 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 NAA16Q6N069 864 aaPredicted RBP14.92□□□□□ -0.02
CLCN6-206ENST00000376496 NAPBQ9H115 298 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 PATL2C9JE40 543 aaKnown RBP14.92□□□□□ -0.02
CLCN6-206ENST00000376496 C6orf229H3BNL8 230 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 EVX2Q03828 476 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 SLC15A2Q16348 729 aa14.92□□□□□ -0.02
CLCN6-206ENST00000376496 CACNA1SQ13698 1873 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 CYP2D7A0A087X1C5 515 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 MAGEB6P1A0A0J9YX57 407 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 B4E1Z4 1266 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 PRC1O43663 620 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 TDO2P48775 406 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 FOSBP53539 338 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 SLC4A8Q2Y0W8 1093 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 DDX11Q96FC9 970 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 LEMD3Q9Y2U8 911 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 NEDD4P46934 1319 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 PPEF1O14829 653 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-206ENST00000376496 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-206ENST00000376496 SCRN1Q12765 414 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 TPRNQ4KMQ1 711 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 CYB5R4Q7L1T6 521 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 MB21D2Q8IYB1 491 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-206ENST00000376496 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
CLCN6-206ENST00000376496 BRIP1Q9BX63 1249 aa14.91□□□□□ -0.02
CLCN6-206ENST00000376496 ALDH8A1Q9H2A2 487 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-206ENST00000376496 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLCN6-206ENST00000376496 SRGNP10124 158 aa14.9□□□□□ -0.02
CLCN6-206ENST00000376496 RALYLQ86SE5 291 aaKnown RBP14.9□□□□□ -0.02
CLCN6-206ENST00000376496 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.024e-6■■□□□ 13.5
CLCN6-206ENST00000376496 GDPD2Q9HCC8 539 aa14.9□□□□□ -0.02
CLCN6-206ENST00000376496 GGA1Q9UJY5 639 aa14.9□□□□□ -0.02
CLCN6-206ENST00000376496 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
CLCN6-206ENST00000376496 HMGB1P09429 215 aaKnown RBP14.9□□□□□ -0.02
CLCN6-206ENST00000376496 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
CLCN6-206ENST00000376496 TBC1D16Q8TBP0 767 aa14.9□□□□□ -0.02
CLCN6-206ENST00000376496 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
CLCN6-206ENST00000376496 SENP2Q9HC62 589 aa14.9□□□□□ -0.02
CLCN6-206ENST00000376496 VPS37CA5D8V6 355 aaPredicted RBP14.89□□□□□ -0.03
CLCN6-206ENST00000376496 DDX11L8A8MPP1 907 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 BBOX1O75936 387 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 DIXDC1Q155Q3 683 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
CLCN6-206ENST00000376496 GTF3C6Q969F1 213 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 CRAMP1Q96RY5 1269 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 TOMM22Q9NS69 142 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 STX6O43752 255 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 CHRNA5P30532 468 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 BRPF3Q9ULD4 1205 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 STK32BQ9NY57 414 aa14.89□□□□□ -0.03
CLCN6-206ENST00000376496 SEMA3EO15041 775 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 PRPF40AO75400 957 aaKnown RBP14.88□□□□□ -0.03
CLCN6-206ENST00000376496 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 TDRD7Q8NHU6 1098 aaKnown RBP14.88□□□□□ -0.03
CLCN6-206ENST00000376496 CD209Q9NNX6 404 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 RXRAP19793 462 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 MCM5P33992 734 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 GSE1Q14687 1217 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 ZNF804AQ7Z570 1209 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 ZKSCAN3Q9BRR0 538 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
CLCN6-206ENST00000376496 ATP2B4P23634 1241 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms