RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 TMEM39BQ9GZU3 492 aa16.64■□□□□ 0.25
CLCN6-205ENST00000376492 CNNM1Q9NRU3 951 aa16.64■□□□□ 0.25
CLCN6-205ENST00000376492 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
CLCN6-205ENST00000376492 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
CLCN6-205ENST00000376492 FAM205AQ6ZU69 1335 aa16.64■□□□□ 0.25
CLCN6-205ENST00000376492 TCP10L2B9ZVM9 353 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 VAMP4O75379 141 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 MIER1Q8N108 512 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 TDRD7Q8NHU6 1098 aaKnown RBP16.63■□□□□ 0.25
CLCN6-205ENST00000376492 SERPINA10Q9UK55 444 aa16.63■□□□□ 0.25
CLCN6-205ENST00000376492 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
CLCN6-205ENST00000376492 MYCP01106 439 aaPredicted RBP16.62■□□□□ 0.25
CLCN6-205ENST00000376492 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
CLCN6-205ENST00000376492 GRIK5Q16478 980 aa16.62■□□□□ 0.25
CLCN6-205ENST00000376492 CCL15Q16663 113 aa16.62■□□□□ 0.25
CLCN6-205ENST00000376492 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
CLCN6-205ENST00000376492 GRM8O00222 908 aa16.61■□□□□ 0.25
CLCN6-205ENST00000376492 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
CLCN6-205ENST00000376492 CRKP46108 304 aa16.61■□□□□ 0.25
CLCN6-205ENST00000376492 FXR1P51114 621 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLCN6-205ENST00000376492 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
CLCN6-205ENST00000376492 SLC9C1Q4G0N8 1177 aa16.61■□□□□ 0.25
CLCN6-205ENST00000376492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLCN6-205ENST00000376492 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
CLCN6-205ENST00000376492 FAM84BQ96KN1 310 aaPredicted RBP16.61■□□□□ 0.25
CLCN6-205ENST00000376492 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
CLCN6-205ENST00000376492 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
CLCN6-205ENST00000376492 GTF2A2P52657 109 aa16.6■□□□□ 0.25
CLCN6-205ENST00000376492 CACNB3P54284 484 aa16.6■□□□□ 0.25
CLCN6-205ENST00000376492 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
CLCN6-205ENST00000376492 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
CLCN6-205ENST00000376492 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
CLCN6-205ENST00000376492 IQSEC3Q9UPP2 1182 aaPredicted RBP16.59■□□□□ 0.25
CLCN6-205ENST00000376492 CSADQ9Y600 493 aa16.59■□□□□ 0.25
CLCN6-205ENST00000376492 ZNF521Q96K83 1311 aa16.59■□□□□ 0.25
CLCN6-205ENST00000376492 ARAP2Q8WZ64 1704 aa16.59■□□□□ 0.25
CLCN6-205ENST00000376492 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
CLCN6-205ENST00000376492 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
CLCN6-205ENST00000376492 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.24
CLCN6-205ENST00000376492 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
CLCN6-205ENST00000376492 COLQQ9Y215 455 aaPredicted RBP16.58■□□□□ 0.24
CLCN6-205ENST00000376492 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
CLCN6-205ENST00000376492 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
CLCN6-205ENST00000376492 TNNI2P48788 182 aa16.57■□□□□ 0.24
CLCN6-205ENST00000376492 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
CLCN6-205ENST00000376492 NBPF11Q86T75 865 aa16.57■□□□□ 0.24
CLCN6-205ENST00000376492 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
CLCN6-205ENST00000376492 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
CLCN6-205ENST00000376492 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
CLCN6-205ENST00000376492 ZSWIM8A7E2V4 1837 aa16.56■□□□□ 0.24
CLCN6-205ENST00000376492 ECM2O94769 699 aaPredicted RBP16.56■□□□□ 0.24
CLCN6-205ENST00000376492 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
CLCN6-205ENST00000376492 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
CLCN6-205ENST00000376492 WRNIP1Q96S55 665 aa16.56■□□□□ 0.24
CLCN6-205ENST00000376492 BTBD19C9JJ37 291 aa16.55■□□□□ 0.24
CLCN6-205ENST00000376492 TLR2O60603 784 aa16.55■□□□□ 0.24
CLCN6-205ENST00000376492 LACTBP83111 547 aaPredicted RBP16.55■□□□□ 0.24
CLCN6-205ENST00000376492 ARHGEF6Q15052 776 aa16.55■□□□□ 0.24
CLCN6-205ENST00000376492 FBXO33Q7Z6M2 555 aa16.55■□□□□ 0.24
CLCN6-205ENST00000376492 RIPOR2Q9Y4F9 1068 aa16.55■□□□□ 0.24
CLCN6-205ENST00000376492 H0YGN5 161 aa16.54■□□□□ 0.24
CLCN6-205ENST00000376492 IRF6O14896 467 aa16.54■□□□□ 0.24
CLCN6-205ENST00000376492 CETPP11597 493 aa16.54■□□□□ 0.24
CLCN6-205ENST00000376492 VPS37DQ86XT2 251 aa16.54■□□□□ 0.24
CLCN6-205ENST00000376492 ERO1BQ86YB8 467 aa16.54■□□□□ 0.24
CLCN6-205ENST00000376492 TEKT1Q969V4 418 aa16.54■□□□□ 0.24
CLCN6-205ENST00000376492 MROH5Q6ZUA9 1318 aa16.53■□□□□ 0.24
CLCN6-205ENST00000376492 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
CLCN6-205ENST00000376492 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
CLCN6-205ENST00000376492 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
CLCN6-205ENST00000376492 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
CLCN6-205ENST00000376492 SZT2Q5T011 3432 aa16.53■□□□□ 0.24
CLCN6-205ENST00000376492 CEP290O15078 2479 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.24
CLCN6-205ENST00000376492 CTGFP29279 349 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
CLCN6-205ENST00000376492 PPIL2Q13356 520 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 KIF22Q14807 665 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 SHISA4Q96DD7 197 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 ZDHHC15Q96MV8 337 aa16.52■□□□□ 0.24
CLCN6-205ENST00000376492 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
CLCN6-205ENST00000376492 RANBP2P49792 3224 aaKnown RBP16.52■□□□□ 0.23
CLCN6-205ENST00000376492 TRIOBPQ9H2D6 2365 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 WDHD1O75717 1129 aaPredicted RBP16.51■□□□□ 0.23
CLCN6-205ENST00000376492 BCAMP50895 628 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 MTFR1Q15390 333 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 APOBEC3HQ6NTF7 200 aaKnown RBP16.51■□□□□ 0.23
CLCN6-205ENST00000376492 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
CLCN6-205ENST00000376492 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 CPA4Q9UI42 421 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 CACNA1FO60840 1977 aa16.51■□□□□ 0.23
CLCN6-205ENST00000376492 INPP5BP32019 993 aa16.5■□□□□ 0.23
CLCN6-205ENST00000376492 CAVIN4Q5BKX8 364 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms