RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 EDC3Q96F86 508 aaKnown RBP25.44■■□□□ 1.66
HLA-C-201ENST00000376228 MYH7P12883 1935 aa25.43■■□□□ 1.66
HLA-C-201ENST00000376228 SLC5A1P13866 664 aa25.43■■□□□ 1.66
HLA-C-201ENST00000376228 HSCBQ8IWL3 235 aa25.43■■□□□ 1.66
HLA-C-201ENST00000376228 UQCRFS1P1P0C7P4 283 aa25.42■■□□□ 1.66
HLA-C-201ENST00000376228 CNOT7Q9UIV1 285 aaKnown RBP25.42■■□□□ 1.66
HLA-C-201ENST00000376228 ARID4AP29374 1257 aaPredicted RBP25.42■■□□□ 1.66
HLA-C-201ENST00000376228 APLP1P51693 650 aa25.42■■□□□ 1.66
HLA-C-201ENST00000376228 LRRFIP1Q32MZ4 808 aaKnown RBP25.42■■□□□ 1.66
HLA-C-201ENST00000376228 MAP1SQ66K74 1059 aaPredicted RBP25.42■■□□□ 1.66
HLA-C-201ENST00000376228 MICALL2Q8IY33 904 aa25.42■■□□□ 1.66
HLA-C-201ENST00000376228 FAM227BQ96M60 508 aa25.42■■□□□ 1.66
HLA-C-201ENST00000376228 ADARB2Q9NS39 739 aaKnown RBP25.42■■□□□ 1.66
HLA-C-201ENST00000376228 FBXW7Q969H0 707 aa25.41■■□□□ 1.66
HLA-C-201ENST00000376228 A0A0D9SFI3 127 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 GOLIM4O00461 696 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 VIL1P09327 827 aaKnown RBP25.4■■□□□ 1.66
HLA-C-201ENST00000376228 USP50Q70EL3 339 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-201ENST00000376228 PODNQ7Z5L7 613 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 KCNB2Q92953 911 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 COA1Q9GZY4 146 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 CCDC171Q6TFL3 1326 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 IRS2Q9Y4H2 1338 aa25.4■■□□□ 1.66
HLA-C-201ENST00000376228 TRPM4Q8TD43 1214 aa25.39■■□□□ 1.66
HLA-C-201ENST00000376228 HELLSQ9NRZ9 838 aa25.39■■□□□ 1.66
HLA-C-201ENST00000376228 UBE4AQ14139 1066 aa25.38■■□□□ 1.65
HLA-C-201ENST00000376228 CCDC102BQ68D86 513 aa25.38■■□□□ 1.65
HLA-C-201ENST00000376228 MAP4K1Q92918 833 aa25.38■■□□□ 1.65
HLA-C-201ENST00000376228 NDUFB9Q9Y6M9 179 aa25.38■■□□□ 1.65
HLA-C-201ENST00000376228 USP17L3A6NCW0 530 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 USP17L4A6NCW7 530 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 ZFYP08048 801 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-201ENST00000376228 RSBN1LQ6PCB5 846 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-201ENST00000376228 USP17L1Q7RTZ2 530 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 SAMD7Q7Z3H4 446 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 DPF2Q92785 391 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 MXD3Q9BW11 206 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 H7C1D1 291 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 RPS12P25398 132 aaKnown RBP25.37■■□□□ 1.65
HLA-C-201ENST00000376228 HIRAP54198 1017 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-201ENST00000376228 TTF1Q15361 905 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-201ENST00000376228 MCMDC2Q4G0Z9 681 aa25.37■■□□□ 1.65
HLA-C-201ENST00000376228 EGFRP00533 1210 aa25.36■■□□□ 1.65
HLA-C-201ENST00000376228 MCAMP43121 646 aa25.36■■□□□ 1.65
HLA-C-201ENST00000376228 PTH1RQ03431 593 aa25.36■■□□□ 1.65
HLA-C-201ENST00000376228 SCARF1Q14162 830 aa25.36■■□□□ 1.65
HLA-C-201ENST00000376228 ZMYM1Q5SVZ6 1142 aa25.36■■□□□ 1.65
HLA-C-201ENST00000376228 PALD1Q9ULE6 856 aa25.36■■□□□ 1.65
HLA-C-201ENST00000376228 DOCK2Q92608 1830 aa25.35■■□□□ 1.65
HLA-C-201ENST00000376228 ZBTB22O15209 634 aa25.35■■□□□ 1.65
HLA-C-201ENST00000376228 RNF113AO15541 343 aaKnown RBP25.35■■□□□ 1.65
HLA-C-201ENST00000376228 ST18O60284 1047 aa25.35■■□□□ 1.65
HLA-C-201ENST00000376228 ITGBL1O95965 494 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-201ENST00000376228 PHKA1P46020 1223 aa25.35■■□□□ 1.65
HLA-C-201ENST00000376228 NECTIN1Q15223 517 aa25.35■■□□□ 1.65
HLA-C-201ENST00000376228 TBC1D10BQ4KMP7 808 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-201ENST00000376228 RBM26Q5T8P6 1007 aaKnown RBP25.35■■□□□ 1.65
HLA-C-201ENST00000376228 CD209Q9NNX6 404 aa25.35■■□□□ 1.65
HLA-C-201ENST00000376228 PASKQ96RG2 1323 aa25.34■■□□□ 1.65
HLA-C-201ENST00000376228 K7ELQ4 463 aaPredicted RBP25.34■■□□□ 1.65
HLA-C-201ENST00000376228 ZAP70P43403 619 aa25.34■■□□□ 1.65
HLA-C-201ENST00000376228 ANTXR1Q9H6X2 564 aa25.34■■□□□ 1.65
HLA-C-201ENST00000376228 POLR2AP24928 1970 aaKnown RBP25.34■■□□□ 1.65
HLA-C-201ENST00000376228 DACT2Q5SW24 774 aa25.33■■□□□ 1.65
HLA-C-201ENST00000376228 C15orf52Q6ZUT6 534 aaKnown RBP25.33■■□□□ 1.65
HLA-C-201ENST00000376228 ZNF804AQ7Z570 1209 aa25.33■■□□□ 1.65
HLA-C-201ENST00000376228 CD2BP2O95400 341 aaKnown RBP25.32■■□□□ 1.64
HLA-C-201ENST00000376228 GTF2IP78347 998 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 AGBL3Q8NEM8 1001 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 SNX14Q9Y5W7 946 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 MYO5AQ9Y4I1 1855 aaKnown RBP25.32■■□□□ 1.64
HLA-C-201ENST00000376228 GYG1P46976 350 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 MCM2P49736 904 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 FMR1Q06787 632 aaKnown RBP eCLIP25.32■■□□□ 1.64
HLA-C-201ENST00000376228 TTLL5Q6EMB2 1281 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 ZNF589Q86UQ0 364 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-201ENST00000376228 GMLQ99445 158 aa25.32■■□□□ 1.64
HLA-C-201ENST00000376228 STRIP1Q5VSL9 837 aa25.31■■□□□ 1.64
HLA-C-201ENST00000376228 ZSCAN25Q6NSZ9 544 aa25.31■■□□□ 1.64
HLA-C-201ENST00000376228 TM6SF1Q9BZW5 370 aa25.31■■□□□ 1.64
HLA-C-201ENST00000376228 JAG2Q9Y219 1238 aa25.31■■□□□ 1.64
HLA-C-201ENST00000376228 RBM8AQ9Y5S9 174 aaKnown RBP25.31■■□□□ 1.64
HLA-C-201ENST00000376228 TRPM7Q96QT4 1865 aa25.31■■□□□ 1.64
HLA-C-201ENST00000376228 CYP2E1P05181 493 aaPredicted RBP25.3■■□□□ 1.64
HLA-C-201ENST00000376228 KIF4BQ2VIQ3 1234 aa25.3■■□□□ 1.64
HLA-C-201ENST00000376228 TSGA10IPQ3SY00 556 aa25.3■■□□□ 1.64
HLA-C-201ENST00000376228 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.3■■□□□ 1.64
HLA-C-201ENST00000376228 HMG20BQ9P0W2 317 aa25.3■■□□□ 1.64
HLA-C-201ENST00000376228 TRAF5O00463 557 aa25.29■■□□□ 1.64
HLA-C-201ENST00000376228 USP17L8P0C7I0 530 aa25.28■■□□□ 1.64
HLA-C-201ENST00000376228 IL1R1P14778 569 aa25.28■■□□□ 1.64
HLA-C-201ENST00000376228 NEK4P51957 841 aa25.28■■□□□ 1.64
HLA-C-201ENST00000376228 RASEFQ8IZ41 740 aa25.28■■□□□ 1.64
HLA-C-201ENST00000376228 SPATA5Q8NB90 893 aa25.28■■□□□ 1.64
HLA-C-201ENST00000376228 DSCC1Q9BVC3 393 aa25.28■■□□□ 1.64
HLA-C-201ENST00000376228 RNF20Q5VTR2 975 aa25.27■■□□□ 1.64
HLA-C-201ENST00000376228 PI16Q6UXB8 463 aa25.27■■□□□ 1.64
HLA-C-201ENST00000376228 DNAJC5GQ8N7S2 189 aa25.27■■□□□ 1.64
HLA-C-201ENST00000376228 APPBP2Q92624 585 aa25.27■■□□□ 1.64
HLA-C-201ENST00000376228 FAM84BQ96KN1 310 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms